Gene : Bradi4g08720 B. distachyon v3.1
Defline:  (1 of 2) K03456 - serine/threonine-protein phosphatase 2A regulatory subunit A (PPP2R1) Genomic Order:  1149
Name:  ? Bradi4g08720 Secondary Identifier:  ? PAC:32787524
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g08720 0.5kb upstream 0.5kb upstream 8056 true Bd4: 7838861-7846916 Brachypodium distachyon
Bradi4g08720 0.5kb upstream 0.5kb upstream 500 false Bd4: 7838861-7839360 Brachypodium distachyon
Bradi4g08720 0.5kb downstream 0.5kb downstream 8056 true Bd4: 7839361-7847416 Brachypodium distachyon
Bradi4g08720 0.5kb downstream 0.5kb downstream 500 false Bd4: 7846917-7847416 Brachypodium distachyon
Bradi4g08720 1.0kb upstream 1.0kb upstream 8556 true Bd4: 7838361-7846916 Brachypodium distachyon
Bradi4g08720 1.0kb upstream 1.0kb upstream 1000 false Bd4: 7838361-7839360 Brachypodium distachyon
Bradi4g08720 1.0kb downstream 1.0kb downstream 8556 true Bd4: 7839361-7847916 Brachypodium distachyon
Bradi4g08720 1.0kb downstream 1.0kb downstream 1000 false Bd4: 7846917-7847916 Brachypodium distachyon
Bradi4g08720 2.0kb upstream 2.0kb upstream 9556 true Bd4: 7837361-7846916 Brachypodium distachyon
Bradi4g08720 2.0kb upstream 2.0kb upstream 2000 false Bd4: 7837361-7839360 Brachypodium distachyon
Bradi4g08720 2.0kb downstream 2.0kb downstream 9556 true Bd4: 7839361-7848916 Brachypodium distachyon
Bradi4g08720 2.0kb downstream 2.0kb downstream 2000 false Bd4: 7846917-7848916 Brachypodium distachyon
Bradi4g08720 5.0kb upstream 5.0kb upstream 12556 true Bd4: 7834361-7846916 Brachypodium distachyon
Bradi4g08720 5.0kb upstream 5.0kb upstream 5000 false Bd4: 7834361-7839360 Brachypodium distachyon
Bradi4g08720 5.0kb downstream 5.0kb downstream 12556 true Bd4: 7839361-7851916 Brachypodium distachyon
Bradi4g08720 5.0kb downstream 5.0kb downstream 5000 false Bd4: 7846917-7851916 Brachypodium distachyon
Bradi4g08720 10.0kb upstream 10.0kb upstream 17556 true Bd4: 7829361-7846916 Brachypodium distachyon
Bradi4g08720 10.0kb upstream 10.0kb upstream 10000 false Bd4: 7829361-7839360 Brachypodium distachyon
Bradi4g08720 10.0kb downstream 10.0kb downstream 17556 true Bd4: 7839361-7856916 Brachypodium distachyon
Bradi4g08720 10.0kb downstream 10.0kb downstream 10000 false Bd4: 7846917-7856916 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124569380 5269 Grass View MSA
122049512 5273 Angiosperm View MSA
121346959 5274 Embryophyte View MSA
123427747 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.869        
cufflinks 10.397     High  
cufflinks 9.685        
cufflinks 8.989        
cufflinks 6.043        
cufflinks 10.045     High  
cufflinks 9.15        
cufflinks 9.022        
cufflinks 9.547     High  
cufflinks 6.384        
cufflinks 6.153        
cufflinks 9.807     High  
cufflinks 5.37        
cufflinks 4.651       Low
cufflinks 6.74        
cufflinks 10.626     High  
cufflinks 7.928        
cufflinks 16.958     High High
cufflinks 8.567        
cufflinks 3.94       Low
cufflinks 9.404        
cufflinks 9.61        
cufflinks 8.387        
cufflinks 9.309     High  
cufflinks 7.925        
cufflinks 8.634        
cufflinks 6.217        
cufflinks 7.623        
cufflinks 8.153        
cufflinks 12.7     High High

0 Strain