Gene : Bradi4g08760 B. distachyon v3.1
Defline:  (1 of 2) PTHR31906:SF5 - PLASTID-LIPID-ASSOCIATED PROTEIN 3, CHLOROPLASTIC-RELATED Genomic Order:  1155
Name:  ? Bradi4g08760 Secondary Identifier:  ? PAC:32789325
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g08760 0.5kb upstream 0.5kb upstream 4000 true Bd4: 7896388-7900387 Brachypodium distachyon
Bradi4g08760 0.5kb upstream 0.5kb upstream 500 false Bd4: 7899888-7900387 Brachypodium distachyon
Bradi4g08760 0.5kb downstream 0.5kb downstream 4000 true Bd4: 7895888-7899887 Brachypodium distachyon
Bradi4g08760 0.5kb downstream 0.5kb downstream 500 false Bd4: 7895888-7896387 Brachypodium distachyon
Bradi4g08760 1.0kb upstream 1.0kb upstream 4500 true Bd4: 7896388-7900887 Brachypodium distachyon
Bradi4g08760 1.0kb upstream 1.0kb upstream 1000 false Bd4: 7899888-7900887 Brachypodium distachyon
Bradi4g08760 1.0kb downstream 1.0kb downstream 4500 true Bd4: 7895388-7899887 Brachypodium distachyon
Bradi4g08760 1.0kb downstream 1.0kb downstream 1000 false Bd4: 7895388-7896387 Brachypodium distachyon
Bradi4g08760 2.0kb upstream 2.0kb upstream 5500 true Bd4: 7896388-7901887 Brachypodium distachyon
Bradi4g08760 2.0kb upstream 2.0kb upstream 2000 false Bd4: 7899888-7901887 Brachypodium distachyon
Bradi4g08760 2.0kb downstream 2.0kb downstream 5500 true Bd4: 7894388-7899887 Brachypodium distachyon
Bradi4g08760 2.0kb downstream 2.0kb downstream 2000 false Bd4: 7894388-7896387 Brachypodium distachyon
Bradi4g08760 5.0kb upstream 5.0kb upstream 8500 true Bd4: 7896388-7904887 Brachypodium distachyon
Bradi4g08760 5.0kb upstream 5.0kb upstream 5000 false Bd4: 7899888-7904887 Brachypodium distachyon
Bradi4g08760 5.0kb downstream 5.0kb downstream 8500 true Bd4: 7891388-7899887 Brachypodium distachyon
Bradi4g08760 5.0kb downstream 5.0kb downstream 5000 false Bd4: 7891388-7896387 Brachypodium distachyon
Bradi4g08760 10.0kb upstream 10.0kb upstream 13500 true Bd4: 7896388-7909887 Brachypodium distachyon
Bradi4g08760 10.0kb upstream 10.0kb upstream 10000 false Bd4: 7899888-7909887 Brachypodium distachyon
Bradi4g08760 10.0kb downstream 10.0kb downstream 13500 true Bd4: 7886388-7899887 Brachypodium distachyon
Bradi4g08760 10.0kb downstream 10.0kb downstream 10000 false Bd4: 7886388-7896387 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124587187 5269 Grass View MSA
122048215 5273 Angiosperm View MSA
121346450 5274 Embryophyte View MSA
123427802 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 56.881     High  
cufflinks 17.048     High Low
cufflinks 14.7     High Low
cufflinks 18.959     High  
cufflinks 86.245     High High
cufflinks 31.214     High  
cufflinks 23.308     High  
cufflinks 43.878     High  
cufflinks 39.838     High  
cufflinks 41.945     High  
cufflinks 93.384     High High
cufflinks 34.587     High  
cufflinks 68.755     High  
cufflinks 98.807     High High
cufflinks 54.233     High  
cufflinks 31.193     High  
cufflinks 50.556     High  
cufflinks 4.985       Low
cufflinks 42.305     High  
cufflinks 141.344     High High
cufflinks 36.355     High  
cufflinks 25.056     High  
cufflinks 50.868     High  
cufflinks 52.624     High  
cufflinks 40.836     High  
cufflinks 16.676     High Low
cufflinks 88.708     High High
cufflinks 20.198     High  
cufflinks 23.083     High  
cufflinks 20.494     High  

0 Strain