Gene : Bradi4g08870 B. distachyon v3.1
Defline:  (1 of 2) PTHR10359//PTHR10359:SF22 - A/G-SPECIFIC ADENINE GLYCOSYLASE/ENDONUCLEASE III // DEMETER-LIKE PROTEIN 2-RELATED Genomic Order:  1174
Name:  ? Bradi4g08870 Secondary Identifier:  ? PAC:32787083
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g08870 0.5kb upstream 0.5kb upstream 15622 true Bd4: 8014433-8030054 Brachypodium distachyon
Bradi4g08870 0.5kb upstream 0.5kb upstream 500 false Bd4: 8029555-8030054 Brachypodium distachyon
Bradi4g08870 0.5kb downstream 0.5kb downstream 15622 true Bd4: 8013933-8029554 Brachypodium distachyon
Bradi4g08870 0.5kb downstream 0.5kb downstream 500 false Bd4: 8013933-8014432 Brachypodium distachyon
Bradi4g08870 1.0kb upstream 1.0kb upstream 16122 true Bd4: 8014433-8030554 Brachypodium distachyon
Bradi4g08870 1.0kb upstream 1.0kb upstream 1000 false Bd4: 8029555-8030554 Brachypodium distachyon
Bradi4g08870 1.0kb downstream 1.0kb downstream 16122 true Bd4: 8013433-8029554 Brachypodium distachyon
Bradi4g08870 1.0kb downstream 1.0kb downstream 1000 false Bd4: 8013433-8014432 Brachypodium distachyon
Bradi4g08870 2.0kb upstream 2.0kb upstream 17122 true Bd4: 8014433-8031554 Brachypodium distachyon
Bradi4g08870 2.0kb upstream 2.0kb upstream 2000 false Bd4: 8029555-8031554 Brachypodium distachyon
Bradi4g08870 2.0kb downstream 2.0kb downstream 17122 true Bd4: 8012433-8029554 Brachypodium distachyon
Bradi4g08870 2.0kb downstream 2.0kb downstream 2000 false Bd4: 8012433-8014432 Brachypodium distachyon
Bradi4g08870 5.0kb upstream 5.0kb upstream 20122 true Bd4: 8014433-8034554 Brachypodium distachyon
Bradi4g08870 5.0kb upstream 5.0kb upstream 5000 false Bd4: 8029555-8034554 Brachypodium distachyon
Bradi4g08870 5.0kb downstream 5.0kb downstream 20122 true Bd4: 8009433-8029554 Brachypodium distachyon
Bradi4g08870 5.0kb downstream 5.0kb downstream 5000 false Bd4: 8009433-8014432 Brachypodium distachyon
Bradi4g08870 10.0kb upstream 10.0kb upstream 25122 true Bd4: 8014433-8039554 Brachypodium distachyon
Bradi4g08870 10.0kb upstream 10.0kb upstream 10000 false Bd4: 8029555-8039554 Brachypodium distachyon
Bradi4g08870 10.0kb downstream 10.0kb downstream 25122 true Bd4: 8004433-8029554 Brachypodium distachyon
Bradi4g08870 10.0kb downstream 10.0kb downstream 10000 false Bd4: 8004433-8014432 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124590070 5269 Grass View MSA
122044419 5273 Angiosperm View MSA
121348532 5274 Embryophyte View MSA
123428690 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.912        
cufflinks 6.189        
cufflinks 6.504       High
cufflinks 3.864        
cufflinks 1.085       Low
cufflinks 5.473        
cufflinks 4.782        
cufflinks 3.87        
cufflinks 5.141        
cufflinks 2.762        
cufflinks 3.413        
cufflinks 5.922        
cufflinks 3.824        
cufflinks 2.419        
cufflinks 2.31        
cufflinks 5.265        
cufflinks 2.067        
cufflinks 6.068        
cufflinks 2.853        
cufflinks 0.708       Low
cufflinks 2.957        
cufflinks 6.762       High
cufflinks 4.19        
cufflinks 4.239        
cufflinks 3.899        
cufflinks 5.266        
cufflinks 3.331        
cufflinks 4.985        
cufflinks 5.213        
cufflinks 6.694       High

0 Strain