Gene : Bradi4g09196 B. distachyon v3.1
Defline:  (1 of 63) PF03514 - GRAS domain family (GRAS) Genomic Order:  1223
Name:  ? Bradi4g09196 Secondary Identifier:  ? PAC:32785292
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g09196 0.5kb upstream 0.5kb upstream 3760 true Bd4: 8524194-8527953 Brachypodium distachyon
Bradi4g09196 0.5kb upstream 0.5kb upstream 500 false Bd4: 8527454-8527953 Brachypodium distachyon
Bradi4g09196 0.5kb downstream 0.5kb downstream 3760 true Bd4: 8523694-8527453 Brachypodium distachyon
Bradi4g09196 0.5kb downstream 0.5kb downstream 500 false Bd4: 8523694-8524193 Brachypodium distachyon
Bradi4g09196 1.0kb upstream 1.0kb upstream 4260 true Bd4: 8524194-8528453 Brachypodium distachyon
Bradi4g09196 1.0kb upstream 1.0kb upstream 1000 false Bd4: 8527454-8528453 Brachypodium distachyon
Bradi4g09196 1.0kb downstream 1.0kb downstream 4260 true Bd4: 8523194-8527453 Brachypodium distachyon
Bradi4g09196 1.0kb downstream 1.0kb downstream 1000 false Bd4: 8523194-8524193 Brachypodium distachyon
Bradi4g09196 2.0kb upstream 2.0kb upstream 5260 true Bd4: 8524194-8529453 Brachypodium distachyon
Bradi4g09196 2.0kb upstream 2.0kb upstream 2000 false Bd4: 8527454-8529453 Brachypodium distachyon
Bradi4g09196 2.0kb downstream 2.0kb downstream 5260 true Bd4: 8522194-8527453 Brachypodium distachyon
Bradi4g09196 2.0kb downstream 2.0kb downstream 2000 false Bd4: 8522194-8524193 Brachypodium distachyon
Bradi4g09196 5.0kb upstream 5.0kb upstream 8260 true Bd4: 8524194-8532453 Brachypodium distachyon
Bradi4g09196 5.0kb upstream 5.0kb upstream 5000 false Bd4: 8527454-8532453 Brachypodium distachyon
Bradi4g09196 5.0kb downstream 5.0kb downstream 8260 true Bd4: 8519194-8527453 Brachypodium distachyon
Bradi4g09196 5.0kb downstream 5.0kb downstream 5000 false Bd4: 8519194-8524193 Brachypodium distachyon
Bradi4g09196 10.0kb upstream 10.0kb upstream 13260 true Bd4: 8524194-8537453 Brachypodium distachyon
Bradi4g09196 10.0kb upstream 10.0kb upstream 10000 false Bd4: 8527454-8537453 Brachypodium distachyon
Bradi4g09196 10.0kb downstream 10.0kb downstream 13260 true Bd4: 8514194-8527453 Brachypodium distachyon
Bradi4g09196 10.0kb downstream 10.0kb downstream 10000 false Bd4: 8514194-8524193 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124588326 5269 Grass View MSA
122048011 5273 Angiosperm View MSA
121350999 5274 Embryophyte View MSA
123381964 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.486        
cufflinks 2.196        
cufflinks 2.361        
cufflinks 2.219        
cufflinks 1.594        
cufflinks 1.648        
cufflinks 2.183        
cufflinks 2.148        
cufflinks 1.84        
cufflinks 1.362        
cufflinks 0.85       Low
cufflinks 1.389        
cufflinks 0.544       Low
cufflinks 0.423       Low
cufflinks 0.831       Low
cufflinks 1.269        
cufflinks 1.529        
cufflinks 6.619       High
cufflinks 4.889       High
cufflinks 1.344        
cufflinks 1.679        
cufflinks 1.978        
cufflinks 2.267        
cufflinks 1.626        
cufflinks 1.836        
cufflinks 2.175        
cufflinks 1.173        
cufflinks 2.244        
cufflinks 1.692        
cufflinks 2.616        

0 Strain