Gene : Bradi4g16870 B. distachyon v3.1
Defline:  (1 of 1) PTHR10992:SF773 - PROTEIN AUXIN RESPONSE 4 Genomic Order:  2264
Name:  ? Bradi4g16870 Secondary Identifier:  ? PAC:32790838
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g16870 0.5kb upstream 0.5kb upstream 3271 true Bd4: 17731955-17735225 Brachypodium distachyon
Bradi4g16870 0.5kb upstream 0.5kb upstream 500 false Bd4: 17731955-17732454 Brachypodium distachyon
Bradi4g16870 0.5kb downstream 0.5kb downstream 3271 true Bd4: 17732455-17735725 Brachypodium distachyon
Bradi4g16870 0.5kb downstream 0.5kb downstream 500 false Bd4: 17735226-17735725 Brachypodium distachyon
Bradi4g16870 1.0kb upstream 1.0kb upstream 3771 true Bd4: 17731455-17735225 Brachypodium distachyon
Bradi4g16870 1.0kb upstream 1.0kb upstream 1000 false Bd4: 17731455-17732454 Brachypodium distachyon
Bradi4g16870 1.0kb downstream 1.0kb downstream 3771 true Bd4: 17732455-17736225 Brachypodium distachyon
Bradi4g16870 1.0kb downstream 1.0kb downstream 1000 false Bd4: 17735226-17736225 Brachypodium distachyon
Bradi4g16870 2.0kb upstream 2.0kb upstream 4771 true Bd4: 17730455-17735225 Brachypodium distachyon
Bradi4g16870 2.0kb upstream 2.0kb upstream 2000 false Bd4: 17730455-17732454 Brachypodium distachyon
Bradi4g16870 2.0kb downstream 2.0kb downstream 4771 true Bd4: 17732455-17737225 Brachypodium distachyon
Bradi4g16870 2.0kb downstream 2.0kb downstream 2000 false Bd4: 17735226-17737225 Brachypodium distachyon
Bradi4g16870 5.0kb upstream 5.0kb upstream 7771 true Bd4: 17727455-17735225 Brachypodium distachyon
Bradi4g16870 5.0kb upstream 5.0kb upstream 5000 false Bd4: 17727455-17732454 Brachypodium distachyon
Bradi4g16870 5.0kb downstream 5.0kb downstream 7771 true Bd4: 17732455-17740225 Brachypodium distachyon
Bradi4g16870 5.0kb downstream 5.0kb downstream 5000 false Bd4: 17735226-17740225 Brachypodium distachyon
Bradi4g16870 10.0kb upstream 10.0kb upstream 12771 true Bd4: 17722455-17735225 Brachypodium distachyon
Bradi4g16870 10.0kb upstream 10.0kb upstream 10000 false Bd4: 17722455-17732454 Brachypodium distachyon
Bradi4g16870 10.0kb downstream 10.0kb downstream 12771 true Bd4: 17732455-17745225 Brachypodium distachyon
Bradi4g16870 10.0kb downstream 10.0kb downstream 10000 false Bd4: 17735226-17745225 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124584985 5269 Grass View MSA
122047835 5273 Angiosperm View MSA
121347873 5274 Embryophyte View MSA
123380660 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.531        
cufflinks 2.596        
cufflinks 2.579        
cufflinks 1.891        
cufflinks 1.305        
cufflinks 1.991        
cufflinks 2.355        
cufflinks 2.098        
cufflinks 1.918        
cufflinks 3.312        
cufflinks 0.605       Low
cufflinks 2.017        
cufflinks 0.576       Low
cufflinks 0.491       Low
cufflinks 1.148        
cufflinks 2.677        
cufflinks 2.843        
cufflinks 8.419       High
cufflinks 3.894        
cufflinks 1.627        
cufflinks 5.729       High
cufflinks 2.362        
cufflinks 1.803        
cufflinks 2.045        
cufflinks 2.242        
cufflinks 3.013        
cufflinks 0.581       Low
cufflinks 2.539        
cufflinks 2.203        
cufflinks 5.103       High

0 Strain