Gene : Bradi4g16980 B. distachyon v3.1
Defline:  (1 of 1) PTHR10804//PTHR10804:SF87 - PROTEASE FAMILY M24 METHIONYL AMINOPEPTIDASE, AMINOPEPTIDASE P // XAA-PRO AMINOPEPTIDASE 1 Genomic Order:  2280
Name:  ? Bradi4g16980 Secondary Identifier:  ? PAC:32785616
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g16980 0.5kb upstream 0.5kb upstream 14739 true Bd4: 17867976-17882714 Brachypodium distachyon
Bradi4g16980 0.5kb upstream 0.5kb upstream 500 false Bd4: 17867976-17868475 Brachypodium distachyon
Bradi4g16980 0.5kb downstream 0.5kb downstream 14739 true Bd4: 17868476-17883214 Brachypodium distachyon
Bradi4g16980 0.5kb downstream 0.5kb downstream 500 false Bd4: 17882715-17883214 Brachypodium distachyon
Bradi4g16980 1.0kb upstream 1.0kb upstream 15239 true Bd4: 17867476-17882714 Brachypodium distachyon
Bradi4g16980 1.0kb upstream 1.0kb upstream 1000 false Bd4: 17867476-17868475 Brachypodium distachyon
Bradi4g16980 1.0kb downstream 1.0kb downstream 15239 true Bd4: 17868476-17883714 Brachypodium distachyon
Bradi4g16980 1.0kb downstream 1.0kb downstream 1000 false Bd4: 17882715-17883714 Brachypodium distachyon
Bradi4g16980 2.0kb upstream 2.0kb upstream 16239 true Bd4: 17866476-17882714 Brachypodium distachyon
Bradi4g16980 2.0kb upstream 2.0kb upstream 2000 false Bd4: 17866476-17868475 Brachypodium distachyon
Bradi4g16980 2.0kb downstream 2.0kb downstream 16239 true Bd4: 17868476-17884714 Brachypodium distachyon
Bradi4g16980 2.0kb downstream 2.0kb downstream 2000 false Bd4: 17882715-17884714 Brachypodium distachyon
Bradi4g16980 5.0kb upstream 5.0kb upstream 19239 true Bd4: 17863476-17882714 Brachypodium distachyon
Bradi4g16980 5.0kb upstream 5.0kb upstream 5000 false Bd4: 17863476-17868475 Brachypodium distachyon
Bradi4g16980 5.0kb downstream 5.0kb downstream 19239 true Bd4: 17868476-17887714 Brachypodium distachyon
Bradi4g16980 5.0kb downstream 5.0kb downstream 5000 false Bd4: 17882715-17887714 Brachypodium distachyon
Bradi4g16980 10.0kb upstream 10.0kb upstream 24239 true Bd4: 17858476-17882714 Brachypodium distachyon
Bradi4g16980 10.0kb upstream 10.0kb upstream 10000 false Bd4: 17858476-17868475 Brachypodium distachyon
Bradi4g16980 10.0kb downstream 10.0kb downstream 24239 true Bd4: 17868476-17892714 Brachypodium distachyon
Bradi4g16980 10.0kb downstream 10.0kb downstream 10000 false Bd4: 17882715-17892714 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124582309 5269 Grass View MSA
122044333 5273 Angiosperm View MSA
121348715 5274 Embryophyte View MSA
123426779 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.232        
cufflinks 5.211        
cufflinks 5.884        
cufflinks 5.309        
cufflinks 6.318        
cufflinks 4.683        
cufflinks 4.225       Low
cufflinks 4.379        
cufflinks 4.671        
cufflinks 4.636        
cufflinks 6.148        
cufflinks 4.496        
cufflinks 3.935       Low
cufflinks 4.353        
cufflinks 4.68        
cufflinks 5.029        
cufflinks 6.101        
cufflinks 9.473       High
cufflinks 14.24     High High
cufflinks 8.549       High
cufflinks 6.257        
cufflinks 5.946        
cufflinks 4.532        
cufflinks 4.677        
cufflinks 4.387        
cufflinks 5.896        
cufflinks 5.24        
cufflinks 5.774        
cufflinks 5.009        
cufflinks 6.042        

0 Strain