Gene : Bradi4g16990 B. distachyon v3.1
Defline:  (1 of 1) PTHR31062//PTHR31062:SF15 - FAMILY NOT NAMED // XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 4-RELATED Genomic Order:  2282
Name:  ? Bradi4g16990 Secondary Identifier:  ? PAC:32787696
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g16990 0.5kb upstream 0.5kb upstream 2818 true Bd4: 17884860-17887677 Brachypodium distachyon
Bradi4g16990 0.5kb upstream 0.5kb upstream 500 false Bd4: 17887178-17887677 Brachypodium distachyon
Bradi4g16990 0.5kb downstream 0.5kb downstream 2818 true Bd4: 17884360-17887177 Brachypodium distachyon
Bradi4g16990 0.5kb downstream 0.5kb downstream 500 false Bd4: 17884360-17884859 Brachypodium distachyon
Bradi4g16990 1.0kb upstream 1.0kb upstream 3318 true Bd4: 17884860-17888177 Brachypodium distachyon
Bradi4g16990 1.0kb upstream 1.0kb upstream 1000 false Bd4: 17887178-17888177 Brachypodium distachyon
Bradi4g16990 1.0kb downstream 1.0kb downstream 3318 true Bd4: 17883860-17887177 Brachypodium distachyon
Bradi4g16990 1.0kb downstream 1.0kb downstream 1000 false Bd4: 17883860-17884859 Brachypodium distachyon
Bradi4g16990 2.0kb upstream 2.0kb upstream 4318 true Bd4: 17884860-17889177 Brachypodium distachyon
Bradi4g16990 2.0kb upstream 2.0kb upstream 2000 false Bd4: 17887178-17889177 Brachypodium distachyon
Bradi4g16990 2.0kb downstream 2.0kb downstream 4318 true Bd4: 17882860-17887177 Brachypodium distachyon
Bradi4g16990 2.0kb downstream 2.0kb downstream 2000 false Bd4: 17882860-17884859 Brachypodium distachyon
Bradi4g16990 5.0kb upstream 5.0kb upstream 7318 true Bd4: 17884860-17892177 Brachypodium distachyon
Bradi4g16990 5.0kb upstream 5.0kb upstream 5000 false Bd4: 17887178-17892177 Brachypodium distachyon
Bradi4g16990 5.0kb downstream 5.0kb downstream 7318 true Bd4: 17879860-17887177 Brachypodium distachyon
Bradi4g16990 5.0kb downstream 5.0kb downstream 5000 false Bd4: 17879860-17884859 Brachypodium distachyon
Bradi4g16990 10.0kb upstream 10.0kb upstream 12318 true Bd4: 17884860-17897177 Brachypodium distachyon
Bradi4g16990 10.0kb upstream 10.0kb upstream 10000 false Bd4: 17887178-17897177 Brachypodium distachyon
Bradi4g16990 10.0kb downstream 10.0kb downstream 12318 true Bd4: 17874860-17887177 Brachypodium distachyon
Bradi4g16990 10.0kb downstream 10.0kb downstream 10000 false Bd4: 17874860-17884859 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124570001 5269 Grass View MSA
122042139 5273 Angiosperm View MSA
121350333 5274 Embryophyte View MSA
123381682 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.816        
cufflinks 6.528        
cufflinks 4.196        
cufflinks 6.047        
cufflinks 15.331     High  
cufflinks 5.86        
cufflinks 8.006        
cufflinks 4.143        
cufflinks 5.74        
cufflinks 4.108        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 3.83        
cufflinks 0.582       Low
cufflinks 0.008     Low Low
cufflinks 1.751        
cufflinks 7.638        
cufflinks 8.611        
cufflinks 6.175        
cufflinks 13.076     High  
cufflinks 3.379        
cufflinks 25.353     High High
cufflinks 2.864        
cufflinks 5.345        
cufflinks 5.341        
cufflinks 8.002        
cufflinks 3.897        
cufflinks 0.497       Low
cufflinks 4.428        
cufflinks 3.483        
cufflinks 11.718     High  

0 Strain