Gene : Bradi4g17160 B. distachyon v3.1
Defline:  (1 of 1) PTHR14025//PTHR14025:SF21 - FAMILY NOT NAMED // DEAD/DEAH BOX HELICASE-RELATED Genomic Order:  2304
Name:  ? Bradi4g17160 Secondary Identifier:  ? PAC:32784964
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g17160 0.5kb upstream 0.5kb upstream 13761 true Bd4: 18169569-18183329 Brachypodium distachyon
Bradi4g17160 0.5kb upstream 0.5kb upstream 500 false Bd4: 18182830-18183329 Brachypodium distachyon
Bradi4g17160 0.5kb downstream 0.5kb downstream 13761 true Bd4: 18169069-18182829 Brachypodium distachyon
Bradi4g17160 0.5kb downstream 0.5kb downstream 500 false Bd4: 18169069-18169568 Brachypodium distachyon
Bradi4g17160 1.0kb upstream 1.0kb upstream 14261 true Bd4: 18169569-18183829 Brachypodium distachyon
Bradi4g17160 1.0kb upstream 1.0kb upstream 1000 false Bd4: 18182830-18183829 Brachypodium distachyon
Bradi4g17160 1.0kb downstream 1.0kb downstream 14261 true Bd4: 18168569-18182829 Brachypodium distachyon
Bradi4g17160 1.0kb downstream 1.0kb downstream 1000 false Bd4: 18168569-18169568 Brachypodium distachyon
Bradi4g17160 2.0kb upstream 2.0kb upstream 15261 true Bd4: 18169569-18184829 Brachypodium distachyon
Bradi4g17160 2.0kb upstream 2.0kb upstream 2000 false Bd4: 18182830-18184829 Brachypodium distachyon
Bradi4g17160 2.0kb downstream 2.0kb downstream 15261 true Bd4: 18167569-18182829 Brachypodium distachyon
Bradi4g17160 2.0kb downstream 2.0kb downstream 2000 false Bd4: 18167569-18169568 Brachypodium distachyon
Bradi4g17160 5.0kb upstream 5.0kb upstream 18261 true Bd4: 18169569-18187829 Brachypodium distachyon
Bradi4g17160 5.0kb upstream 5.0kb upstream 5000 false Bd4: 18182830-18187829 Brachypodium distachyon
Bradi4g17160 5.0kb downstream 5.0kb downstream 18261 true Bd4: 18164569-18182829 Brachypodium distachyon
Bradi4g17160 5.0kb downstream 5.0kb downstream 5000 false Bd4: 18164569-18169568 Brachypodium distachyon
Bradi4g17160 10.0kb upstream 10.0kb upstream 23261 true Bd4: 18169569-18192829 Brachypodium distachyon
Bradi4g17160 10.0kb upstream 10.0kb upstream 10000 false Bd4: 18182830-18192829 Brachypodium distachyon
Bradi4g17160 10.0kb downstream 10.0kb downstream 23261 true Bd4: 18159569-18182829 Brachypodium distachyon
Bradi4g17160 10.0kb downstream 10.0kb downstream 10000 false Bd4: 18159569-18169568 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124572287 5269 Grass View MSA
122045154 5273 Angiosperm View MSA
121349019 5274 Embryophyte View MSA
123425837 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.488        
cufflinks 2.411       High
cufflinks 1.385        
cufflinks 2.014       High
cufflinks 0.13       Low
cufflinks 1.297        
cufflinks 1.696       High
cufflinks 0.579        
cufflinks 0.847        
cufflinks 0.316        
cufflinks 1.536        
cufflinks 0.708        
cufflinks 0.641        
cufflinks 1.013        
cufflinks 0.383        
cufflinks 1.341        
cufflinks 0.347        
cufflinks 0.178       Low
cufflinks 0.497        
cufflinks 0.145     Low Low
cufflinks 0.313        
cufflinks 0.557        
cufflinks 0.546        
cufflinks 0.817        
cufflinks 1.39        
cufflinks 0.985        
cufflinks 0.778        
cufflinks 0.719        
cufflinks 0.605        
cufflinks 0.674        

0 Strain