Gene : Bradi4g12210 B. distachyon v3.1
Defline:  (1 of 4) PF07647 - SAM domain (Sterile alpha motif) (SAM_2) Genomic Order:  1664
Name:  ? Bradi4g12210 Secondary Identifier:  ? PAC:32789125
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g12210 0.5kb upstream 0.5kb upstream 3917 true Bd4: 12238910-12242826 Brachypodium distachyon
Bradi4g12210 0.5kb upstream 0.5kb upstream 500 false Bd4: 12238910-12239409 Brachypodium distachyon
Bradi4g12210 0.5kb downstream 0.5kb downstream 3917 true Bd4: 12239410-12243326 Brachypodium distachyon
Bradi4g12210 0.5kb downstream 0.5kb downstream 500 false Bd4: 12242827-12243326 Brachypodium distachyon
Bradi4g12210 1.0kb upstream 1.0kb upstream 4417 true Bd4: 12238410-12242826 Brachypodium distachyon
Bradi4g12210 1.0kb upstream 1.0kb upstream 1000 false Bd4: 12238410-12239409 Brachypodium distachyon
Bradi4g12210 1.0kb downstream 1.0kb downstream 4417 true Bd4: 12239410-12243826 Brachypodium distachyon
Bradi4g12210 1.0kb downstream 1.0kb downstream 1000 false Bd4: 12242827-12243826 Brachypodium distachyon
Bradi4g12210 2.0kb upstream 2.0kb upstream 5417 true Bd4: 12237410-12242826 Brachypodium distachyon
Bradi4g12210 2.0kb upstream 2.0kb upstream 2000 false Bd4: 12237410-12239409 Brachypodium distachyon
Bradi4g12210 2.0kb downstream 2.0kb downstream 5417 true Bd4: 12239410-12244826 Brachypodium distachyon
Bradi4g12210 2.0kb downstream 2.0kb downstream 2000 false Bd4: 12242827-12244826 Brachypodium distachyon
Bradi4g12210 5.0kb upstream 5.0kb upstream 8417 true Bd4: 12234410-12242826 Brachypodium distachyon
Bradi4g12210 5.0kb upstream 5.0kb upstream 5000 false Bd4: 12234410-12239409 Brachypodium distachyon
Bradi4g12210 5.0kb downstream 5.0kb downstream 8417 true Bd4: 12239410-12247826 Brachypodium distachyon
Bradi4g12210 5.0kb downstream 5.0kb downstream 5000 false Bd4: 12242827-12247826 Brachypodium distachyon
Bradi4g12210 10.0kb upstream 10.0kb upstream 13417 true Bd4: 12229410-12242826 Brachypodium distachyon
Bradi4g12210 10.0kb upstream 10.0kb upstream 10000 false Bd4: 12229410-12239409 Brachypodium distachyon
Bradi4g12210 10.0kb downstream 10.0kb downstream 13417 true Bd4: 12239410-12252826 Brachypodium distachyon
Bradi4g12210 10.0kb downstream 10.0kb downstream 10000 false Bd4: 12242827-12252826 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124587072 5269 Grass View MSA
122050384 5273 Angiosperm View MSA
121345034 5274 Embryophyte View MSA
123380141 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.694        
cufflinks 4.149        
cufflinks 5.771        
cufflinks 6.921        
cufflinks 6.261        
cufflinks 4.533        
cufflinks 4.759        
cufflinks 4.385        
cufflinks 4.82        
cufflinks 8.769       High
cufflinks 3.674       Low
cufflinks 4.494        
cufflinks 4.23        
cufflinks 4.429        
cufflinks 7.769        
cufflinks 3.903       Low
cufflinks 7.501        
cufflinks 3.551       Low
cufflinks 5.332        
cufflinks 9.912       High
cufflinks 7.847        
cufflinks 4.285        
cufflinks 4.207        
cufflinks 4.136        
cufflinks 5.445        
cufflinks 7.698        
cufflinks 5.448        
cufflinks 8.716       High
cufflinks 6.338        
cufflinks 6.63        

0 Strain