Gene : Bradi4g20580 B. distachyon v3.1
Defline:  (1 of 1) 1.1.1.105 - All-trans-retinol dehydrogenase (NAD(+)) Genomic Order:  2611
Name:  ? Bradi4g20580 Secondary Identifier:  ? PAC:32785612
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g20580 0.5kb upstream 0.5kb upstream 6605 true Bd4: 23563432-23570036 Brachypodium distachyon
Bradi4g20580 0.5kb upstream 0.5kb upstream 500 false Bd4: 23569537-23570036 Brachypodium distachyon
Bradi4g20580 0.5kb downstream 0.5kb downstream 6605 true Bd4: 23562932-23569536 Brachypodium distachyon
Bradi4g20580 0.5kb downstream 0.5kb downstream 500 false Bd4: 23562932-23563431 Brachypodium distachyon
Bradi4g20580 1.0kb upstream 1.0kb upstream 7105 true Bd4: 23563432-23570536 Brachypodium distachyon
Bradi4g20580 1.0kb upstream 1.0kb upstream 1000 false Bd4: 23569537-23570536 Brachypodium distachyon
Bradi4g20580 1.0kb downstream 1.0kb downstream 7105 true Bd4: 23562432-23569536 Brachypodium distachyon
Bradi4g20580 1.0kb downstream 1.0kb downstream 1000 false Bd4: 23562432-23563431 Brachypodium distachyon
Bradi4g20580 2.0kb upstream 2.0kb upstream 8105 true Bd4: 23563432-23571536 Brachypodium distachyon
Bradi4g20580 2.0kb upstream 2.0kb upstream 2000 false Bd4: 23569537-23571536 Brachypodium distachyon
Bradi4g20580 2.0kb downstream 2.0kb downstream 8105 true Bd4: 23561432-23569536 Brachypodium distachyon
Bradi4g20580 2.0kb downstream 2.0kb downstream 2000 false Bd4: 23561432-23563431 Brachypodium distachyon
Bradi4g20580 5.0kb upstream 5.0kb upstream 11105 true Bd4: 23563432-23574536 Brachypodium distachyon
Bradi4g20580 5.0kb upstream 5.0kb upstream 5000 false Bd4: 23569537-23574536 Brachypodium distachyon
Bradi4g20580 5.0kb downstream 5.0kb downstream 11105 true Bd4: 23558432-23569536 Brachypodium distachyon
Bradi4g20580 5.0kb downstream 5.0kb downstream 5000 false Bd4: 23558432-23563431 Brachypodium distachyon
Bradi4g20580 10.0kb upstream 10.0kb upstream 16105 true Bd4: 23563432-23579536 Brachypodium distachyon
Bradi4g20580 10.0kb upstream 10.0kb upstream 10000 false Bd4: 23569537-23579536 Brachypodium distachyon
Bradi4g20580 10.0kb downstream 10.0kb downstream 16105 true Bd4: 23553432-23569536 Brachypodium distachyon
Bradi4g20580 10.0kb downstream 10.0kb downstream 10000 false Bd4: 23553432-23563431 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124568644 5269 Grass View MSA
122042430 5273 Angiosperm View MSA
121346750 5274 Embryophyte View MSA
123424961 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.738        
cufflinks 3.409        
cufflinks 3.688        
cufflinks 4.006        
cufflinks 2.076       Low
cufflinks 2.774        
cufflinks 2.914        
cufflinks 2.319        
cufflinks 2.556        
cufflinks 3.452        
cufflinks 4.167       High
cufflinks 2.703        
cufflinks 3.187        
cufflinks 3.476        
cufflinks 2.882        
cufflinks 3.082        
cufflinks 2.745        
cufflinks 1.622       Low
cufflinks 3.217        
cufflinks 1.435       Low
cufflinks 2.599        
cufflinks 2.981        
cufflinks 2.314        
cufflinks 2.636        
cufflinks 3.123        
cufflinks 4.441       High
cufflinks 3.068        
cufflinks 3.998        
cufflinks 3.516        
cufflinks 2.468        

0 Strain