Gene : Bradi4g20955 B. distachyon v3.1
Defline:  (1 of 5) PTHR32108:SF0 - DNA-DIRECTED RNA POLYMERASE SUBUNIT ALPHA Genomic Order:  2657
Name:  ? Bradi4g20955 Secondary Identifier:  ? PAC:32790407
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g20955 0.5kb upstream 0.5kb upstream 1494 true Bd4: 23962786-23964279 Brachypodium distachyon
Bradi4g20955 0.5kb upstream 0.5kb upstream 500 false Bd4: 23962786-23963285 Brachypodium distachyon
Bradi4g20955 0.5kb downstream 0.5kb downstream 1494 true Bd4: 23963286-23964779 Brachypodium distachyon
Bradi4g20955 0.5kb downstream 0.5kb downstream 500 false Bd4: 23964280-23964779 Brachypodium distachyon
Bradi4g20955 1.0kb upstream 1.0kb upstream 1994 true Bd4: 23962286-23964279 Brachypodium distachyon
Bradi4g20955 1.0kb upstream 1.0kb upstream 1000 false Bd4: 23962286-23963285 Brachypodium distachyon
Bradi4g20955 1.0kb downstream 1.0kb downstream 1994 true Bd4: 23963286-23965279 Brachypodium distachyon
Bradi4g20955 1.0kb downstream 1.0kb downstream 1000 false Bd4: 23964280-23965279 Brachypodium distachyon
Bradi4g20955 2.0kb upstream 2.0kb upstream 2994 true Bd4: 23961286-23964279 Brachypodium distachyon
Bradi4g20955 2.0kb upstream 2.0kb upstream 2000 false Bd4: 23961286-23963285 Brachypodium distachyon
Bradi4g20955 2.0kb downstream 2.0kb downstream 2994 true Bd4: 23963286-23966279 Brachypodium distachyon
Bradi4g20955 2.0kb downstream 2.0kb downstream 2000 false Bd4: 23964280-23966279 Brachypodium distachyon
Bradi4g20955 5.0kb upstream 5.0kb upstream 5994 true Bd4: 23958286-23964279 Brachypodium distachyon
Bradi4g20955 5.0kb upstream 5.0kb upstream 5000 false Bd4: 23958286-23963285 Brachypodium distachyon
Bradi4g20955 5.0kb downstream 5.0kb downstream 5994 true Bd4: 23963286-23969279 Brachypodium distachyon
Bradi4g20955 5.0kb downstream 5.0kb downstream 5000 false Bd4: 23964280-23969279 Brachypodium distachyon
Bradi4g20955 10.0kb upstream 10.0kb upstream 10994 true Bd4: 23953286-23964279 Brachypodium distachyon
Bradi4g20955 10.0kb upstream 10.0kb upstream 10000 false Bd4: 23953286-23963285 Brachypodium distachyon
Bradi4g20955 10.0kb downstream 10.0kb downstream 10994 true Bd4: 23963286-23974279 Brachypodium distachyon
Bradi4g20955 10.0kb downstream 10.0kb downstream 10000 false Bd4: 23964280-23974279 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121972774 5273 Angiosperm View MSA
124546701 5269 Grass View MSA
121243243 5274 Embryophyte View MSA
123282014 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain