Gene : Bradi4g14570 B. distachyon v3.1
Defline:  (1 of 7) PTHR22975//PTHR22975:SF7 - UBIQUITIN SPECIFIC PROTEINASE Genomic Order:  1978
Name:  ? Bradi4g14570 Secondary Identifier:  ? PAC:32784432
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g14570 0.5kb upstream 0.5kb upstream 7980 true Bd4: 15085735-15093714 Brachypodium distachyon
Bradi4g14570 0.5kb upstream 0.5kb upstream 500 false Bd4: 15093215-15093714 Brachypodium distachyon
Bradi4g14570 0.5kb downstream 0.5kb downstream 7980 true Bd4: 15085235-15093214 Brachypodium distachyon
Bradi4g14570 0.5kb downstream 0.5kb downstream 500 false Bd4: 15085235-15085734 Brachypodium distachyon
Bradi4g14570 1.0kb upstream 1.0kb upstream 8480 true Bd4: 15085735-15094214 Brachypodium distachyon
Bradi4g14570 1.0kb upstream 1.0kb upstream 1000 false Bd4: 15093215-15094214 Brachypodium distachyon
Bradi4g14570 1.0kb downstream 1.0kb downstream 8480 true Bd4: 15084735-15093214 Brachypodium distachyon
Bradi4g14570 1.0kb downstream 1.0kb downstream 1000 false Bd4: 15084735-15085734 Brachypodium distachyon
Bradi4g14570 2.0kb upstream 2.0kb upstream 9480 true Bd4: 15085735-15095214 Brachypodium distachyon
Bradi4g14570 2.0kb upstream 2.0kb upstream 2000 false Bd4: 15093215-15095214 Brachypodium distachyon
Bradi4g14570 2.0kb downstream 2.0kb downstream 9480 true Bd4: 15083735-15093214 Brachypodium distachyon
Bradi4g14570 2.0kb downstream 2.0kb downstream 2000 false Bd4: 15083735-15085734 Brachypodium distachyon
Bradi4g14570 5.0kb upstream 5.0kb upstream 12480 true Bd4: 15085735-15098214 Brachypodium distachyon
Bradi4g14570 5.0kb upstream 5.0kb upstream 5000 false Bd4: 15093215-15098214 Brachypodium distachyon
Bradi4g14570 5.0kb downstream 5.0kb downstream 12480 true Bd4: 15080735-15093214 Brachypodium distachyon
Bradi4g14570 5.0kb downstream 5.0kb downstream 5000 false Bd4: 15080735-15085734 Brachypodium distachyon
Bradi4g14570 10.0kb upstream 10.0kb upstream 17480 true Bd4: 15085735-15103214 Brachypodium distachyon
Bradi4g14570 10.0kb upstream 10.0kb upstream 10000 false Bd4: 15093215-15103214 Brachypodium distachyon
Bradi4g14570 10.0kb downstream 10.0kb downstream 17480 true Bd4: 15075735-15093214 Brachypodium distachyon
Bradi4g14570 10.0kb downstream 10.0kb downstream 10000 false Bd4: 15075735-15085734 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027840 5273 Angiosperm View MSA
124588843 5269 Grass View MSA
121297435 5274 Embryophyte View MSA
123426830 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.033     Low  
cufflinks 0.233       High
cufflinks 0.291       High
cufflinks 0.166       High
cufflinks 0.011     Low Low
cufflinks 0.1        
cufflinks 0.153        
cufflinks 0.052     Low  
cufflinks 0.085     Low  
cufflinks 0.053     Low  
cufflinks 0.059     Low  
cufflinks 0.065     Low  
cufflinks 0.061        
cufflinks 0.047     Low  
cufflinks 0.023     Low Low
cufflinks 0.111        
cufflinks 0.007     Low Low
cufflinks 0.048     Low  
cufflinks 0.013     Low Low
cufflinks 0.075     Low  
cufflinks 0.046     Low  
cufflinks 0.107     Low  
cufflinks 0.058     Low  
cufflinks 0.06     Low  
cufflinks 0.083     Low  
cufflinks 0.201       High
cufflinks 0.014     Low Low
cufflinks 0.172       High
cufflinks 0.119        
cufflinks 0.072     Low  

0 Strain