Gene : Bradi4g14840 B. distachyon v3.1
Defline:  (1 of 1) 2.8.4.3 - tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase / tRNA-i6A37 methylthiotransferase Genomic Order:  2017
Name:  ? Bradi4g14840 Secondary Identifier:  ? PAC:32786855
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g14840 0.5kb upstream 0.5kb upstream 21672 true Bd4: 15492165-15513836 Brachypodium distachyon
Bradi4g14840 0.5kb upstream 0.5kb upstream 500 false Bd4: 15492165-15492664 Brachypodium distachyon
Bradi4g14840 0.5kb downstream 0.5kb downstream 21672 true Bd4: 15492665-15514336 Brachypodium distachyon
Bradi4g14840 0.5kb downstream 0.5kb downstream 500 false Bd4: 15513837-15514336 Brachypodium distachyon
Bradi4g14840 1.0kb upstream 1.0kb upstream 22172 true Bd4: 15491665-15513836 Brachypodium distachyon
Bradi4g14840 1.0kb upstream 1.0kb upstream 1000 false Bd4: 15491665-15492664 Brachypodium distachyon
Bradi4g14840 1.0kb downstream 1.0kb downstream 22172 true Bd4: 15492665-15514836 Brachypodium distachyon
Bradi4g14840 1.0kb downstream 1.0kb downstream 1000 false Bd4: 15513837-15514836 Brachypodium distachyon
Bradi4g14840 2.0kb upstream 2.0kb upstream 23172 true Bd4: 15490665-15513836 Brachypodium distachyon
Bradi4g14840 2.0kb upstream 2.0kb upstream 2000 false Bd4: 15490665-15492664 Brachypodium distachyon
Bradi4g14840 2.0kb downstream 2.0kb downstream 23172 true Bd4: 15492665-15515836 Brachypodium distachyon
Bradi4g14840 2.0kb downstream 2.0kb downstream 2000 false Bd4: 15513837-15515836 Brachypodium distachyon
Bradi4g14840 5.0kb upstream 5.0kb upstream 26172 true Bd4: 15487665-15513836 Brachypodium distachyon
Bradi4g14840 5.0kb upstream 5.0kb upstream 5000 false Bd4: 15487665-15492664 Brachypodium distachyon
Bradi4g14840 5.0kb downstream 5.0kb downstream 26172 true Bd4: 15492665-15518836 Brachypodium distachyon
Bradi4g14840 5.0kb downstream 5.0kb downstream 5000 false Bd4: 15513837-15518836 Brachypodium distachyon
Bradi4g14840 10.0kb upstream 10.0kb upstream 31172 true Bd4: 15482665-15513836 Brachypodium distachyon
Bradi4g14840 10.0kb upstream 10.0kb upstream 10000 false Bd4: 15482665-15492664 Brachypodium distachyon
Bradi4g14840 10.0kb downstream 10.0kb downstream 31172 true Bd4: 15492665-15523836 Brachypodium distachyon
Bradi4g14840 10.0kb downstream 10.0kb downstream 10000 false Bd4: 15513837-15523836 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124576915 5269 Grass View MSA
122047649 5273 Angiosperm View MSA
121350864 5274 Embryophyte View MSA
123427541 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.815        
cufflinks 7.783       High
cufflinks 6.711        
cufflinks 7.294       High
cufflinks 1.91       Low
cufflinks 6.48        
cufflinks 6.975        
cufflinks 4.899        
cufflinks 5.19        
cufflinks 4.628        
cufflinks 3.072        
cufflinks 6.472        
cufflinks 4.77        
cufflinks 4.279        
cufflinks 4.343        
cufflinks 7.308       High
cufflinks 3.76        
cufflinks 1.493       Low
cufflinks 2.887        
cufflinks 1.032       Low
cufflinks 3.679        
cufflinks 5.528        
cufflinks 4.588        
cufflinks 5.21        
cufflinks 5.919        
cufflinks 6.143        
cufflinks 3.72        
cufflinks 5.781        
cufflinks 5.865        
cufflinks 5.758        

0 Strain