Gene : Bradi4g14900 B. distachyon v3.1
Defline:  (1 of 1) PTHR31846//PTHR31846:SF13 - FAMILY NOT NAMED // CRM FAMILY MEMBER 3A-RELATED Genomic Order:  2024
Name:  ? Bradi4g14900 Secondary Identifier:  ? PAC:32784620
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g14900 0.5kb upstream 0.5kb upstream 8492 true Bd4: 15574094-15582585 Brachypodium distachyon
Bradi4g14900 0.5kb upstream 0.5kb upstream 500 false Bd4: 15574094-15574593 Brachypodium distachyon
Bradi4g14900 0.5kb downstream 0.5kb downstream 8492 true Bd4: 15574594-15583085 Brachypodium distachyon
Bradi4g14900 0.5kb downstream 0.5kb downstream 500 false Bd4: 15582586-15583085 Brachypodium distachyon
Bradi4g14900 1.0kb upstream 1.0kb upstream 8992 true Bd4: 15573594-15582585 Brachypodium distachyon
Bradi4g14900 1.0kb upstream 1.0kb upstream 1000 false Bd4: 15573594-15574593 Brachypodium distachyon
Bradi4g14900 1.0kb downstream 1.0kb downstream 8992 true Bd4: 15574594-15583585 Brachypodium distachyon
Bradi4g14900 1.0kb downstream 1.0kb downstream 1000 false Bd4: 15582586-15583585 Brachypodium distachyon
Bradi4g14900 2.0kb upstream 2.0kb upstream 9992 true Bd4: 15572594-15582585 Brachypodium distachyon
Bradi4g14900 2.0kb upstream 2.0kb upstream 2000 false Bd4: 15572594-15574593 Brachypodium distachyon
Bradi4g14900 2.0kb downstream 2.0kb downstream 9992 true Bd4: 15574594-15584585 Brachypodium distachyon
Bradi4g14900 2.0kb downstream 2.0kb downstream 2000 false Bd4: 15582586-15584585 Brachypodium distachyon
Bradi4g14900 5.0kb upstream 5.0kb upstream 12992 true Bd4: 15569594-15582585 Brachypodium distachyon
Bradi4g14900 5.0kb upstream 5.0kb upstream 5000 false Bd4: 15569594-15574593 Brachypodium distachyon
Bradi4g14900 5.0kb downstream 5.0kb downstream 12992 true Bd4: 15574594-15587585 Brachypodium distachyon
Bradi4g14900 5.0kb downstream 5.0kb downstream 5000 false Bd4: 15582586-15587585 Brachypodium distachyon
Bradi4g14900 10.0kb upstream 10.0kb upstream 17992 true Bd4: 15564594-15582585 Brachypodium distachyon
Bradi4g14900 10.0kb upstream 10.0kb upstream 10000 false Bd4: 15564594-15574593 Brachypodium distachyon
Bradi4g14900 10.0kb downstream 10.0kb downstream 17992 true Bd4: 15574594-15592585 Brachypodium distachyon
Bradi4g14900 10.0kb downstream 10.0kb downstream 10000 false Bd4: 15582586-15592585 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124569286 5269 Grass View MSA
122043214 5273 Angiosperm View MSA
121349891 5274 Embryophyte View MSA
123381486 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.863        
cufflinks 18.565     High High
cufflinks 14.542     High  
cufflinks 14.746     High  
cufflinks 4.475        
cufflinks 15.492     High  
cufflinks 16.727     High  
cufflinks 8.469        
cufflinks 11.9     High  
cufflinks 6.033        
cufflinks 20.964     High High
cufflinks 13.098     High  
cufflinks 12.568     High  
cufflinks 17.765     High High
cufflinks 5.036        
cufflinks 16.636     High  
cufflinks 7.928        
cufflinks 2.022       Low
cufflinks 10.155        
cufflinks 2.1       Low
cufflinks 5.339        
cufflinks 9.46        
cufflinks 8.392        
cufflinks 12.053     High  
cufflinks 15.176     High  
cufflinks 11.289     High  
cufflinks 14.678     High  
cufflinks 9.542        
cufflinks 9.777        
cufflinks 9.989        

0 Strain