Gene : Bradi4g14970 B. distachyon v3.1
Defline:  (1 of 8) PF14309//PF14383 - Domain of unknown function (DUF4378) (DUF4378) // DUF761-associated sequence motif (VARLMGL) Genomic Order:  2037
Name:  ? Bradi4g14970 Secondary Identifier:  ? PAC:32783085
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g14970 0.5kb upstream 0.5kb upstream 3298 true Bd4: 15660270-15663567 Brachypodium distachyon
Bradi4g14970 0.5kb upstream 0.5kb upstream 500 false Bd4: 15660270-15660769 Brachypodium distachyon
Bradi4g14970 0.5kb downstream 0.5kb downstream 3298 true Bd4: 15660770-15664067 Brachypodium distachyon
Bradi4g14970 0.5kb downstream 0.5kb downstream 500 false Bd4: 15663568-15664067 Brachypodium distachyon
Bradi4g14970 1.0kb upstream 1.0kb upstream 3798 true Bd4: 15659770-15663567 Brachypodium distachyon
Bradi4g14970 1.0kb upstream 1.0kb upstream 1000 false Bd4: 15659770-15660769 Brachypodium distachyon
Bradi4g14970 1.0kb downstream 1.0kb downstream 3798 true Bd4: 15660770-15664567 Brachypodium distachyon
Bradi4g14970 1.0kb downstream 1.0kb downstream 1000 false Bd4: 15663568-15664567 Brachypodium distachyon
Bradi4g14970 2.0kb upstream 2.0kb upstream 4798 true Bd4: 15658770-15663567 Brachypodium distachyon
Bradi4g14970 2.0kb upstream 2.0kb upstream 2000 false Bd4: 15658770-15660769 Brachypodium distachyon
Bradi4g14970 2.0kb downstream 2.0kb downstream 4798 true Bd4: 15660770-15665567 Brachypodium distachyon
Bradi4g14970 2.0kb downstream 2.0kb downstream 2000 false Bd4: 15663568-15665567 Brachypodium distachyon
Bradi4g14970 5.0kb upstream 5.0kb upstream 7798 true Bd4: 15655770-15663567 Brachypodium distachyon
Bradi4g14970 5.0kb upstream 5.0kb upstream 5000 false Bd4: 15655770-15660769 Brachypodium distachyon
Bradi4g14970 5.0kb downstream 5.0kb downstream 7798 true Bd4: 15660770-15668567 Brachypodium distachyon
Bradi4g14970 5.0kb downstream 5.0kb downstream 5000 false Bd4: 15663568-15668567 Brachypodium distachyon
Bradi4g14970 10.0kb upstream 10.0kb upstream 12798 true Bd4: 15650770-15663567 Brachypodium distachyon
Bradi4g14970 10.0kb upstream 10.0kb upstream 10000 false Bd4: 15650770-15660769 Brachypodium distachyon
Bradi4g14970 10.0kb downstream 10.0kb downstream 12798 true Bd4: 15660770-15673567 Brachypodium distachyon
Bradi4g14970 10.0kb downstream 10.0kb downstream 10000 false Bd4: 15663568-15673567 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124577026 5269 Grass View MSA
122048942 5273 Angiosperm View MSA
121311180 5274 Embryophyte View MSA
123348511 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.754        
cufflinks 1.332        
cufflinks 1.292        
cufflinks 1.347        
cufflinks 0.77        
cufflinks 1.295        
cufflinks 1.511        
cufflinks 0.994        
cufflinks 1.342        
cufflinks 1.112        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.77        
cufflinks 0.024     Low Low
cufflinks 0.007     Low Low
cufflinks 0.131       Low
cufflinks 1.327        
cufflinks 1.194        
cufflinks 3.19       High
cufflinks 1.665        
cufflinks 0.423        
cufflinks 2.478        
cufflinks 1.299        
cufflinks 1.319        
cufflinks 1.228        
cufflinks 1.719        
cufflinks 1.296        
cufflinks 0.107       Low
cufflinks 1.714        
cufflinks 1.602        
cufflinks 2.575        

0 Strain