Gene : Pp3c12_11030 P. patens v3.3
Genomic Order:  484 Name:  ? Pp3c12_11030
Secondary Identifier:  ? PAC:32972496
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

11 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c12_11030 0.5kb upstream 0.5kb upstream 2893 true Chr12: 7410548-7413440 Physcomitrium patens
Pp3c12_11030 0.5kb upstream 0.5kb upstream 500 false Chr12: 7410548-7411047 Physcomitrium patens
Pp3c12_11030 0.5kb downstream 0.5kb downstream 2893 true Chr12: 7411048-7413940 Physcomitrium patens
Pp3c12_11030 0.5kb downstream 0.5kb downstream 500 false Chr12: 7413441-7413940 Physcomitrium patens
Pp3c12_11030 1.0kb upstream 1.0kb upstream 3393 true Chr12: 7410048-7413440 Physcomitrium patens
Pp3c12_11030 1.0kb upstream 1.0kb upstream 1000 false Chr12: 7410048-7411047 Physcomitrium patens
Pp3c12_11030 1.0kb downstream 1.0kb downstream 3393 true Chr12: 7411048-7414440 Physcomitrium patens
Pp3c12_11030 1.0kb downstream 1.0kb downstream 1000 false Chr12: 7413441-7414440 Physcomitrium patens
Pp3c12_11030 2.0kb upstream 2.0kb upstream 4393 true Chr12: 7409048-7413440 Physcomitrium patens
Pp3c12_11030 2.0kb upstream 2.0kb upstream 2000 false Chr12: 7409048-7411047 Physcomitrium patens
Pp3c12_11030 2.0kb downstream 2.0kb downstream 4393 true Chr12: 7411048-7415440 Physcomitrium patens
Pp3c12_11030 2.0kb downstream 2.0kb downstream 2000 false Chr12: 7413441-7415440 Physcomitrium patens
Pp3c12_11030 5.0kb upstream 5.0kb upstream 7393 true Chr12: 7406048-7413440 Physcomitrium patens
Pp3c12_11030 5.0kb upstream 5.0kb upstream 5000 false Chr12: 7406048-7411047 Physcomitrium patens
Pp3c12_11030 5.0kb downstream 5.0kb downstream 7393 true Chr12: 7411048-7418440 Physcomitrium patens
Pp3c12_11030 5.0kb downstream 5.0kb downstream 5000 false Chr12: 7413441-7418440 Physcomitrium patens
Pp3c12_11030 10.0kb upstream 10.0kb upstream 12393 true Chr12: 7401048-7413440 Physcomitrium patens
Pp3c12_11030 10.0kb upstream 10.0kb upstream 10000 false Chr12: 7401048-7411047 Physcomitrium patens
Pp3c12_11030 10.0kb downstream 10.0kb downstream 12393 true Chr12: 7411048-7423440 Physcomitrium patens
Pp3c12_11030 10.0kb downstream 10.0kb downstream 10000 false Chr12: 7413441-7423440 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121347558 5274 Embryophyte View MSA
123380572 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.599        
cufflinks 9.526       High
cufflinks 10.107       High
cufflinks 6.793        
cufflinks 5.058        
cufflinks 8.541       High
cufflinks 5.16        
cufflinks 7.113        
cufflinks 6.005        
cufflinks 7.657        
cufflinks 6.857        
cufflinks 4.516        
cufflinks 6.184        
cufflinks 5.657        
cufflinks 8.167       High
cufflinks 3.166       Low
cufflinks 3.352       Low
cufflinks 4.272       Low
cufflinks 4.342       Low
cufflinks 6.953        
cufflinks 3.356       Low
cufflinks 5.337        
cufflinks 6.861        
cufflinks 7.11        
cufflinks 9.34       High
cufflinks 5.538        
cufflinks 5.096        
cufflinks 7.599        
cufflinks 4.54        
cufflinks 5.257        

0 Strain