Gene : Pp3c12_17200 P. patens v3.3
Defline:  (1 of 1) PTHR11732//PTHR11732:SF185 - ALDO/KETO REDUCTASE Genomic Order:  756
Name:  ? Pp3c12_17200 Secondary Identifier:  ? PAC:32973647
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

8 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c12_17200 0.5kb upstream 0.5kb upstream 3162 true Chr12: 11357931-11361092 Physcomitrium patens
Pp3c12_17200 0.5kb upstream 0.5kb upstream 500 false Chr12: 11360593-11361092 Physcomitrium patens
Pp3c12_17200 0.5kb downstream 0.5kb downstream 3162 true Chr12: 11357431-11360592 Physcomitrium patens
Pp3c12_17200 0.5kb downstream 0.5kb downstream 500 false Chr12: 11357431-11357930 Physcomitrium patens
Pp3c12_17200 1.0kb upstream 1.0kb upstream 3662 true Chr12: 11357931-11361592 Physcomitrium patens
Pp3c12_17200 1.0kb upstream 1.0kb upstream 1000 false Chr12: 11360593-11361592 Physcomitrium patens
Pp3c12_17200 1.0kb downstream 1.0kb downstream 3662 true Chr12: 11356931-11360592 Physcomitrium patens
Pp3c12_17200 1.0kb downstream 1.0kb downstream 1000 false Chr12: 11356931-11357930 Physcomitrium patens
Pp3c12_17200 2.0kb upstream 2.0kb upstream 4662 true Chr12: 11357931-11362592 Physcomitrium patens
Pp3c12_17200 2.0kb upstream 2.0kb upstream 2000 false Chr12: 11360593-11362592 Physcomitrium patens
Pp3c12_17200 2.0kb downstream 2.0kb downstream 4662 true Chr12: 11355931-11360592 Physcomitrium patens
Pp3c12_17200 2.0kb downstream 2.0kb downstream 2000 false Chr12: 11355931-11357930 Physcomitrium patens
Pp3c12_17200 5.0kb upstream 5.0kb upstream 7662 true Chr12: 11357931-11365592 Physcomitrium patens
Pp3c12_17200 5.0kb upstream 5.0kb upstream 5000 false Chr12: 11360593-11365592 Physcomitrium patens
Pp3c12_17200 5.0kb downstream 5.0kb downstream 7662 true Chr12: 11352931-11360592 Physcomitrium patens
Pp3c12_17200 5.0kb downstream 5.0kb downstream 5000 false Chr12: 11352931-11357930 Physcomitrium patens
Pp3c12_17200 10.0kb upstream 10.0kb upstream 12662 true Chr12: 11357931-11370592 Physcomitrium patens
Pp3c12_17200 10.0kb upstream 10.0kb upstream 10000 false Chr12: 11360593-11370592 Physcomitrium patens
Pp3c12_17200 10.0kb downstream 10.0kb downstream 12662 true Chr12: 11347931-11360592 Physcomitrium patens
Pp3c12_17200 10.0kb downstream 10.0kb downstream 10000 false Chr12: 11347931-11357930 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121342373 5274 Embryophyte View MSA
123427382 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.29       Low
cufflinks 0.507        
cufflinks 1.354        
cufflinks 0.561        
cufflinks 2.889       High
cufflinks 2.982       High
cufflinks 0.96        
cufflinks 0.885        
cufflinks 0.39        
cufflinks 1.722       High
cufflinks 1.749       High
cufflinks 0.429        
cufflinks 0.322        
cufflinks 0.185       Low
cufflinks 0.34        
cufflinks 0.507        
cufflinks 0.27       Low
cufflinks 0.458        
cufflinks 0.514        
cufflinks 0.368        
cufflinks 2.945       High
cufflinks 0.489        
cufflinks 0.218       Low
cufflinks 0.205       Low
cufflinks 2.964       High
cufflinks 1.804       High
cufflinks 0.538        
cufflinks 0.451        
cufflinks 1.352        
cufflinks 1.033        

0 Strain