Gene : Pp3c12_15420 P. patens v3.3
Defline:  (1 of 3) PTHR14146 - EXOCYST COMPLEX COMPONENT 4 Genomic Order:  701
Name:  ? Pp3c12_15420 Secondary Identifier:  ? PAC:32973208
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

7 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c12_15420 0.5kb upstream 0.5kb upstream 13282 true Chr12: 10295932-10309213 Physcomitrium patens
Pp3c12_15420 0.5kb upstream 0.5kb upstream 500 false Chr12: 10295932-10296431 Physcomitrium patens
Pp3c12_15420 0.5kb downstream 0.5kb downstream 13282 true Chr12: 10296432-10309713 Physcomitrium patens
Pp3c12_15420 0.5kb downstream 0.5kb downstream 500 false Chr12: 10309214-10309713 Physcomitrium patens
Pp3c12_15420 1.0kb upstream 1.0kb upstream 13782 true Chr12: 10295432-10309213 Physcomitrium patens
Pp3c12_15420 1.0kb upstream 1.0kb upstream 1000 false Chr12: 10295432-10296431 Physcomitrium patens
Pp3c12_15420 1.0kb downstream 1.0kb downstream 13782 true Chr12: 10296432-10310213 Physcomitrium patens
Pp3c12_15420 1.0kb downstream 1.0kb downstream 1000 false Chr12: 10309214-10310213 Physcomitrium patens
Pp3c12_15420 2.0kb upstream 2.0kb upstream 14782 true Chr12: 10294432-10309213 Physcomitrium patens
Pp3c12_15420 2.0kb upstream 2.0kb upstream 2000 false Chr12: 10294432-10296431 Physcomitrium patens
Pp3c12_15420 2.0kb downstream 2.0kb downstream 14782 true Chr12: 10296432-10311213 Physcomitrium patens
Pp3c12_15420 2.0kb downstream 2.0kb downstream 2000 false Chr12: 10309214-10311213 Physcomitrium patens
Pp3c12_15420 5.0kb upstream 5.0kb upstream 17782 true Chr12: 10291432-10309213 Physcomitrium patens
Pp3c12_15420 5.0kb upstream 5.0kb upstream 5000 false Chr12: 10291432-10296431 Physcomitrium patens
Pp3c12_15420 5.0kb downstream 5.0kb downstream 17782 true Chr12: 10296432-10314213 Physcomitrium patens
Pp3c12_15420 5.0kb downstream 5.0kb downstream 5000 false Chr12: 10309214-10314213 Physcomitrium patens
Pp3c12_15420 10.0kb upstream 10.0kb upstream 22782 true Chr12: 10286432-10309213 Physcomitrium patens
Pp3c12_15420 10.0kb upstream 10.0kb upstream 10000 false Chr12: 10286432-10296431 Physcomitrium patens
Pp3c12_15420 10.0kb downstream 10.0kb downstream 22782 true Chr12: 10296432-10319213 Physcomitrium patens
Pp3c12_15420 10.0kb downstream 10.0kb downstream 10000 false Chr12: 10309214-10319213 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121343762 5274 Embryophyte View MSA
123379904 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.971       Low
cufflinks 6.382        
cufflinks 3.4        
cufflinks 1.256       Low
cufflinks 7.462        
cufflinks 7.582        
cufflinks 12.757       High
cufflinks 10.288       High
cufflinks 4.766        
cufflinks 6.229        
cufflinks 8.563        
cufflinks 5.209        
cufflinks 4.665        
cufflinks 7.524        
cufflinks 4.705        
cufflinks 4.562        
cufflinks 0.776       Low
cufflinks 2.233       Low
cufflinks 6.788        
cufflinks 5.474        
cufflinks 8.616        
cufflinks 3.229        
cufflinks 8.731        
cufflinks 5.516        
cufflinks 3.004        
cufflinks 3.372        
cufflinks 1.517       Low
cufflinks 15.542       High
cufflinks 13.254       High
cufflinks 10.07       High

0 Strain