Gene : Pp3c12_14310 P. patens v3.3
Defline:  (1 of 3) KOG1617 - CDP-alcohol phosphatidyltransferase/Phosphatidylglycerol-phosphate synthase Genomic Order:  644
Name:  ? Pp3c12_14310 Secondary Identifier:  ? PAC:32974568
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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9 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c12_14310 0.5kb upstream 0.5kb upstream 5003 true Chr12: 9591790-9596792 Physcomitrium patens
Pp3c12_14310 0.5kb upstream 0.5kb upstream 500 false Chr12: 9591790-9592289 Physcomitrium patens
Pp3c12_14310 0.5kb downstream 0.5kb downstream 5003 true Chr12: 9592290-9597292 Physcomitrium patens
Pp3c12_14310 0.5kb downstream 0.5kb downstream 500 false Chr12: 9596793-9597292 Physcomitrium patens
Pp3c12_14310 1.0kb upstream 1.0kb upstream 5503 true Chr12: 9591290-9596792 Physcomitrium patens
Pp3c12_14310 1.0kb upstream 1.0kb upstream 1000 false Chr12: 9591290-9592289 Physcomitrium patens
Pp3c12_14310 1.0kb downstream 1.0kb downstream 5503 true Chr12: 9592290-9597792 Physcomitrium patens
Pp3c12_14310 1.0kb downstream 1.0kb downstream 1000 false Chr12: 9596793-9597792 Physcomitrium patens
Pp3c12_14310 2.0kb upstream 2.0kb upstream 6503 true Chr12: 9590290-9596792 Physcomitrium patens
Pp3c12_14310 2.0kb upstream 2.0kb upstream 2000 false Chr12: 9590290-9592289 Physcomitrium patens
Pp3c12_14310 2.0kb downstream 2.0kb downstream 6503 true Chr12: 9592290-9598792 Physcomitrium patens
Pp3c12_14310 2.0kb downstream 2.0kb downstream 2000 false Chr12: 9596793-9598792 Physcomitrium patens
Pp3c12_14310 5.0kb upstream 5.0kb upstream 9503 true Chr12: 9587290-9596792 Physcomitrium patens
Pp3c12_14310 5.0kb upstream 5.0kb upstream 5000 false Chr12: 9587290-9592289 Physcomitrium patens
Pp3c12_14310 5.0kb downstream 5.0kb downstream 9503 true Chr12: 9592290-9601792 Physcomitrium patens
Pp3c12_14310 5.0kb downstream 5.0kb downstream 5000 false Chr12: 9596793-9601792 Physcomitrium patens
Pp3c12_14310 10.0kb upstream 10.0kb upstream 14503 true Chr12: 9582290-9596792 Physcomitrium patens
Pp3c12_14310 10.0kb upstream 10.0kb upstream 10000 false Chr12: 9582290-9592289 Physcomitrium patens
Pp3c12_14310 10.0kb downstream 10.0kb downstream 14503 true Chr12: 9592290-9606792 Physcomitrium patens
Pp3c12_14310 10.0kb downstream 10.0kb downstream 10000 false Chr12: 9596793-9606792 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121347843 5274 Embryophyte View MSA
123423962 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 26.215     High  
cufflinks 32.319     High  
cufflinks 28.695     High  
cufflinks 23.761     High  
cufflinks 24.75     High  
cufflinks 27.035     High  
cufflinks 26.481     High  
cufflinks 27.472     High  
cufflinks 20.412        
cufflinks 22.834     High  
cufflinks 52.589     High High
cufflinks 21.475     High  
cufflinks 41.028     High High
cufflinks 17.953       Low
cufflinks 13.957       Low
cufflinks 29.67     High  
cufflinks 26.128     High  
cufflinks 31.922     High  
cufflinks 27.403     High  
cufflinks 18.558     High  
cufflinks 23.843     High  
cufflinks 20.826        
cufflinks 19.871     High  
cufflinks 18.339        
cufflinks 31.777     High  
cufflinks 17.858       Low
cufflinks 21.302     High  
cufflinks 13.135       Low
cufflinks 17.454       Low
cufflinks 30.924     High  

0 Strain