Gene : Pp3c12_11660 P. patens v3.3
Defline:  (1 of 2) PTHR11119//PTHR11119:SF36 - XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER Genomic Order:  523
Name:  ? Pp3c12_11660 Secondary Identifier:  ? PAC:32972233
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

10 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c12_11660 0.5kb upstream 0.5kb upstream 5349 true Chr12: 7697865-7703213 Physcomitrium patens
Pp3c12_11660 0.5kb upstream 0.5kb upstream 500 false Chr12: 7697865-7698364 Physcomitrium patens
Pp3c12_11660 0.5kb downstream 0.5kb downstream 5349 true Chr12: 7698365-7703713 Physcomitrium patens
Pp3c12_11660 0.5kb downstream 0.5kb downstream 500 false Chr12: 7703214-7703713 Physcomitrium patens
Pp3c12_11660 1.0kb upstream 1.0kb upstream 5849 true Chr12: 7697365-7703213 Physcomitrium patens
Pp3c12_11660 1.0kb upstream 1.0kb upstream 1000 false Chr12: 7697365-7698364 Physcomitrium patens
Pp3c12_11660 1.0kb downstream 1.0kb downstream 5849 true Chr12: 7698365-7704213 Physcomitrium patens
Pp3c12_11660 1.0kb downstream 1.0kb downstream 1000 false Chr12: 7703214-7704213 Physcomitrium patens
Pp3c12_11660 2.0kb upstream 2.0kb upstream 6849 true Chr12: 7696365-7703213 Physcomitrium patens
Pp3c12_11660 2.0kb upstream 2.0kb upstream 2000 false Chr12: 7696365-7698364 Physcomitrium patens
Pp3c12_11660 2.0kb downstream 2.0kb downstream 6849 true Chr12: 7698365-7705213 Physcomitrium patens
Pp3c12_11660 2.0kb downstream 2.0kb downstream 2000 false Chr12: 7703214-7705213 Physcomitrium patens
Pp3c12_11660 5.0kb upstream 5.0kb upstream 9849 true Chr12: 7693365-7703213 Physcomitrium patens
Pp3c12_11660 5.0kb upstream 5.0kb upstream 5000 false Chr12: 7693365-7698364 Physcomitrium patens
Pp3c12_11660 5.0kb downstream 5.0kb downstream 9849 true Chr12: 7698365-7708213 Physcomitrium patens
Pp3c12_11660 5.0kb downstream 5.0kb downstream 5000 false Chr12: 7703214-7708213 Physcomitrium patens
Pp3c12_11660 10.0kb upstream 10.0kb upstream 14849 true Chr12: 7688365-7703213 Physcomitrium patens
Pp3c12_11660 10.0kb upstream 10.0kb upstream 10000 false Chr12: 7688365-7698364 Physcomitrium patens
Pp3c12_11660 10.0kb downstream 10.0kb downstream 14849 true Chr12: 7698365-7713213 Physcomitrium patens
Pp3c12_11660 10.0kb downstream 10.0kb downstream 10000 false Chr12: 7703214-7713213 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121342975 5274 Embryophyte View MSA
123428829 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.988        
cufflinks 6.924        
cufflinks 31.304     High High
cufflinks 8.995        
cufflinks 7.953        
cufflinks 6.367        
cufflinks 28.641     High High
cufflinks 3.893        
cufflinks 4.15        
cufflinks 0.36       Low
cufflinks 9.094        
cufflinks 6.686        
cufflinks 1.757       Low
cufflinks 13.328        
cufflinks 8.153        
cufflinks 16.908        
cufflinks 7.753        
cufflinks 8.288        
cufflinks 10.406        
cufflinks 3.42        
cufflinks 10.489        
cufflinks 7.422        
cufflinks 0.383       Low
cufflinks 10.864        
cufflinks 5.259        
cufflinks 7.993        
cufflinks 2.149       Low
cufflinks 38.204     High High
cufflinks 4.847        
cufflinks 16.769        

0 Strain