Gene : Pp3c13_19650 P. patens v3.3
Defline:  (1 of 1) PTHR23350 - PEROXISOME ASSEMBLY PROTEIN 10 Genomic Order:  826
Name:  ? Pp3c13_19650 Secondary Identifier:  ? PAC:32930867
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

11 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c13_19650 0.5kb upstream 0.5kb upstream 5250 true Chr13: 14001733-14006982 Physcomitrium patens
Pp3c13_19650 0.5kb upstream 0.5kb upstream 500 false Chr13: 14006483-14006982 Physcomitrium patens
Pp3c13_19650 0.5kb downstream 0.5kb downstream 5250 true Chr13: 14001233-14006482 Physcomitrium patens
Pp3c13_19650 0.5kb downstream 0.5kb downstream 500 false Chr13: 14001233-14001732 Physcomitrium patens
Pp3c13_19650 1.0kb upstream 1.0kb upstream 5750 true Chr13: 14001733-14007482 Physcomitrium patens
Pp3c13_19650 1.0kb upstream 1.0kb upstream 1000 false Chr13: 14006483-14007482 Physcomitrium patens
Pp3c13_19650 1.0kb downstream 1.0kb downstream 5750 true Chr13: 14000733-14006482 Physcomitrium patens
Pp3c13_19650 1.0kb downstream 1.0kb downstream 1000 false Chr13: 14000733-14001732 Physcomitrium patens
Pp3c13_19650 2.0kb upstream 2.0kb upstream 6750 true Chr13: 14001733-14008482 Physcomitrium patens
Pp3c13_19650 2.0kb upstream 2.0kb upstream 2000 false Chr13: 14006483-14008482 Physcomitrium patens
Pp3c13_19650 2.0kb downstream 2.0kb downstream 6750 true Chr13: 13999733-14006482 Physcomitrium patens
Pp3c13_19650 2.0kb downstream 2.0kb downstream 2000 false Chr13: 13999733-14001732 Physcomitrium patens
Pp3c13_19650 5.0kb upstream 5.0kb upstream 9750 true Chr13: 14001733-14011482 Physcomitrium patens
Pp3c13_19650 5.0kb upstream 5.0kb upstream 5000 false Chr13: 14006483-14011482 Physcomitrium patens
Pp3c13_19650 5.0kb downstream 5.0kb downstream 9750 true Chr13: 13996733-14006482 Physcomitrium patens
Pp3c13_19650 5.0kb downstream 5.0kb downstream 5000 false Chr13: 13996733-14001732 Physcomitrium patens
Pp3c13_19650 10.0kb upstream 10.0kb upstream 14750 true Chr13: 14001733-14016482 Physcomitrium patens
Pp3c13_19650 10.0kb upstream 10.0kb upstream 10000 false Chr13: 14006483-14016482 Physcomitrium patens
Pp3c13_19650 10.0kb downstream 10.0kb downstream 14750 true Chr13: 13991733-14006482 Physcomitrium patens
Pp3c13_19650 10.0kb downstream 10.0kb downstream 10000 false Chr13: 13991733-14001732 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121346227 5274 Embryophyte View MSA
123427898 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 275.094     High  
cufflinks 236.968     High  
cufflinks 269.744     High  
cufflinks 344.707     High High
cufflinks 199.544     High Low
cufflinks 299.739     High  
cufflinks 259.568     High  
cufflinks 183.165     High Low
cufflinks 267.183     High  
cufflinks 319.86     High  
cufflinks 271.012     High  
cufflinks 267.903     High  
cufflinks 347.15     High High
cufflinks 255.469     High  
cufflinks 212.758     High Low
cufflinks 229.022     High  
cufflinks 238.136     High  
cufflinks 228.684     High  
cufflinks 209.633     High Low
cufflinks 377.715     High High
cufflinks 364.54     High High
cufflinks 270.038     High  
cufflinks 355.688     High High
cufflinks 355.32     High High
cufflinks 270.425     High  
cufflinks 261.527     High  
cufflinks 284.377     High  
cufflinks 307.434     High  
cufflinks 324.658     High  
cufflinks 189.12     High Low

0 Strain