Gene : Pp3c13_20560 P. patens v3.3
Defline:  (1 of 2) KOG2001 - Gamma-tubulin complex, DGRIP84/SPC97 component Genomic Order:  883
Name:  ? Pp3c13_20560 Secondary Identifier:  ? PAC:32932289
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c13_20560 0.5kb upstream 0.5kb upstream 10288 true Chr13: 14429883-14440170 Physcomitrium patens
Pp3c13_20560 0.5kb upstream 0.5kb upstream 500 false Chr13: 14429883-14430382 Physcomitrium patens
Pp3c13_20560 0.5kb downstream 0.5kb downstream 10288 true Chr13: 14430383-14440670 Physcomitrium patens
Pp3c13_20560 0.5kb downstream 0.5kb downstream 500 false Chr13: 14440171-14440670 Physcomitrium patens
Pp3c13_20560 1.0kb upstream 1.0kb upstream 10788 true Chr13: 14429383-14440170 Physcomitrium patens
Pp3c13_20560 1.0kb upstream 1.0kb upstream 1000 false Chr13: 14429383-14430382 Physcomitrium patens
Pp3c13_20560 1.0kb downstream 1.0kb downstream 10788 true Chr13: 14430383-14441170 Physcomitrium patens
Pp3c13_20560 1.0kb downstream 1.0kb downstream 1000 false Chr13: 14440171-14441170 Physcomitrium patens
Pp3c13_20560 2.0kb upstream 2.0kb upstream 11788 true Chr13: 14428383-14440170 Physcomitrium patens
Pp3c13_20560 2.0kb upstream 2.0kb upstream 2000 false Chr13: 14428383-14430382 Physcomitrium patens
Pp3c13_20560 2.0kb downstream 2.0kb downstream 11788 true Chr13: 14430383-14442170 Physcomitrium patens
Pp3c13_20560 2.0kb downstream 2.0kb downstream 2000 false Chr13: 14440171-14442170 Physcomitrium patens
Pp3c13_20560 5.0kb upstream 5.0kb upstream 14788 true Chr13: 14425383-14440170 Physcomitrium patens
Pp3c13_20560 5.0kb upstream 5.0kb upstream 5000 false Chr13: 14425383-14430382 Physcomitrium patens
Pp3c13_20560 5.0kb downstream 5.0kb downstream 14788 true Chr13: 14430383-14445170 Physcomitrium patens
Pp3c13_20560 5.0kb downstream 5.0kb downstream 5000 false Chr13: 14440171-14445170 Physcomitrium patens
Pp3c13_20560 10.0kb upstream 10.0kb upstream 19788 true Chr13: 14420383-14440170 Physcomitrium patens
Pp3c13_20560 10.0kb upstream 10.0kb upstream 10000 false Chr13: 14420383-14430382 Physcomitrium patens
Pp3c13_20560 10.0kb downstream 10.0kb downstream 19788 true Chr13: 14430383-14450170 Physcomitrium patens
Pp3c13_20560 10.0kb downstream 10.0kb downstream 10000 false Chr13: 14440171-14450170 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121336563 5274 Embryophyte View MSA
123373384 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.003     Low Low
cufflinks 0.03     Low  
cufflinks 0.013     Low  
cufflinks 0.019     Low  
cufflinks 0.004     Low  
cufflinks 0.001     Low Low
cufflinks 0.002     Low Low
cufflinks 0.016     Low  
cufflinks 0.073     Low High
cufflinks 0.05     Low High
cufflinks 0.026     Low  
cufflinks 0.013     Low  
cufflinks 0.021     Low  
cufflinks 0.005     Low  
cufflinks 0.01     Low  
cufflinks 0.012     Low  
cufflinks 0.024     Low  
cufflinks 0.008     Low  
cufflinks 0.016     Low  
cufflinks 0.038     Low High
cufflinks 0.001     Low Low
cufflinks 0.003     Low Low
cufflinks 0.023     Low  
cufflinks 0.042     Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.026     Low  
cufflinks 0.01     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.038     Low High
cufflinks 0.022     Low  

0 Strain