Gene : Pp3c14_14060 P. patens v3.3
Defline:  (1 of 1) PTHR34108:SF1 - SEPTUM SITE-DETERMINING PROTEIN MINC Genomic Order:  712
Name:  ? Pp3c14_14060 Secondary Identifier:  ? PAC:32960233
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

10 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c14_14060 0.5kb upstream 0.5kb upstream 5550 true Chr14: 8951858-8957407 Physcomitrium patens
Pp3c14_14060 0.5kb upstream 0.5kb upstream 500 false Chr14: 8956908-8957407 Physcomitrium patens
Pp3c14_14060 0.5kb downstream 0.5kb downstream 5550 true Chr14: 8951358-8956907 Physcomitrium patens
Pp3c14_14060 0.5kb downstream 0.5kb downstream 500 false Chr14: 8951358-8951857 Physcomitrium patens
Pp3c14_14060 1.0kb upstream 1.0kb upstream 6050 true Chr14: 8951858-8957907 Physcomitrium patens
Pp3c14_14060 1.0kb upstream 1.0kb upstream 1000 false Chr14: 8956908-8957907 Physcomitrium patens
Pp3c14_14060 1.0kb downstream 1.0kb downstream 6050 true Chr14: 8950858-8956907 Physcomitrium patens
Pp3c14_14060 1.0kb downstream 1.0kb downstream 1000 false Chr14: 8950858-8951857 Physcomitrium patens
Pp3c14_14060 2.0kb upstream 2.0kb upstream 7050 true Chr14: 8951858-8958907 Physcomitrium patens
Pp3c14_14060 2.0kb upstream 2.0kb upstream 2000 false Chr14: 8956908-8958907 Physcomitrium patens
Pp3c14_14060 2.0kb downstream 2.0kb downstream 7050 true Chr14: 8949858-8956907 Physcomitrium patens
Pp3c14_14060 2.0kb downstream 2.0kb downstream 2000 false Chr14: 8949858-8951857 Physcomitrium patens
Pp3c14_14060 5.0kb upstream 5.0kb upstream 10050 true Chr14: 8951858-8961907 Physcomitrium patens
Pp3c14_14060 5.0kb upstream 5.0kb upstream 5000 false Chr14: 8956908-8961907 Physcomitrium patens
Pp3c14_14060 5.0kb downstream 5.0kb downstream 10050 true Chr14: 8946858-8956907 Physcomitrium patens
Pp3c14_14060 5.0kb downstream 5.0kb downstream 5000 false Chr14: 8946858-8951857 Physcomitrium patens
Pp3c14_14060 10.0kb upstream 10.0kb upstream 15050 true Chr14: 8951858-8966907 Physcomitrium patens
Pp3c14_14060 10.0kb upstream 10.0kb upstream 10000 false Chr14: 8956908-8966907 Physcomitrium patens
Pp3c14_14060 10.0kb downstream 10.0kb downstream 15050 true Chr14: 8941858-8956907 Physcomitrium patens
Pp3c14_14060 10.0kb downstream 10.0kb downstream 10000 false Chr14: 8941858-8951857 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121343495 5274 Embryophyte View MSA
123427235 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.847        
cufflinks 5.913        
cufflinks 6.209        
cufflinks 0.943       Low
cufflinks 3.885        
cufflinks 5.479        
cufflinks 7.602        
cufflinks 5.904        
cufflinks 7.559        
cufflinks 4.124        
cufflinks 5.355        
cufflinks 4.834        
cufflinks 6.656        
cufflinks 4.7        
cufflinks 6.17        
cufflinks 7.401        
cufflinks 5.094        
cufflinks 7.085        
cufflinks 6.849        
cufflinks 5.528        
cufflinks 5.372        
cufflinks 6.856        
cufflinks 6.413        
cufflinks 7.724        
cufflinks 5.106        
cufflinks 0.57       Low
cufflinks 3.503        
cufflinks 7.433        
cufflinks 5.39        
cufflinks 5.232        

0 Strain