Gene : Pp3c14_17140 P. patens v3.3
Defline:  (1 of 6) KOG4674 - Uncharacterized conserved coiled-coil protein Genomic Order:  852
Name:  ? Pp3c14_17140 Secondary Identifier:  ? PAC:32961119
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c14_17140 0.5kb upstream 0.5kb upstream 10047 true Chr14: 11177770-11187816 Physcomitrium patens
Pp3c14_17140 0.5kb upstream 0.5kb upstream 500 false Chr14: 11187317-11187816 Physcomitrium patens
Pp3c14_17140 0.5kb downstream 0.5kb downstream 10047 true Chr14: 11177270-11187316 Physcomitrium patens
Pp3c14_17140 0.5kb downstream 0.5kb downstream 500 false Chr14: 11177270-11177769 Physcomitrium patens
Pp3c14_17140 1.0kb upstream 1.0kb upstream 10547 true Chr14: 11177770-11188316 Physcomitrium patens
Pp3c14_17140 1.0kb upstream 1.0kb upstream 1000 false Chr14: 11187317-11188316 Physcomitrium patens
Pp3c14_17140 1.0kb downstream 1.0kb downstream 10547 true Chr14: 11176770-11187316 Physcomitrium patens
Pp3c14_17140 1.0kb downstream 1.0kb downstream 1000 false Chr14: 11176770-11177769 Physcomitrium patens
Pp3c14_17140 2.0kb upstream 2.0kb upstream 11547 true Chr14: 11177770-11189316 Physcomitrium patens
Pp3c14_17140 2.0kb upstream 2.0kb upstream 2000 false Chr14: 11187317-11189316 Physcomitrium patens
Pp3c14_17140 2.0kb downstream 2.0kb downstream 11547 true Chr14: 11175770-11187316 Physcomitrium patens
Pp3c14_17140 2.0kb downstream 2.0kb downstream 2000 false Chr14: 11175770-11177769 Physcomitrium patens
Pp3c14_17140 5.0kb upstream 5.0kb upstream 14547 true Chr14: 11177770-11192316 Physcomitrium patens
Pp3c14_17140 5.0kb upstream 5.0kb upstream 5000 false Chr14: 11187317-11192316 Physcomitrium patens
Pp3c14_17140 5.0kb downstream 5.0kb downstream 14547 true Chr14: 11172770-11187316 Physcomitrium patens
Pp3c14_17140 5.0kb downstream 5.0kb downstream 5000 false Chr14: 11172770-11177769 Physcomitrium patens
Pp3c14_17140 10.0kb upstream 10.0kb upstream 19547 true Chr14: 11177770-11197316 Physcomitrium patens
Pp3c14_17140 10.0kb upstream 10.0kb upstream 10000 false Chr14: 11187317-11197316 Physcomitrium patens
Pp3c14_17140 10.0kb downstream 10.0kb downstream 19547 true Chr14: 11167770-11187316 Physcomitrium patens
Pp3c14_17140 10.0kb downstream 10.0kb downstream 10000 false Chr14: 11167770-11177769 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121351089 5274 Embryophyte View MSA
123382004 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.015        
cufflinks 0.748        
cufflinks 5.68       High
cufflinks 2.462        
cufflinks 1.408        
cufflinks 2.415        
cufflinks 2.46        
cufflinks 0.013     Low Low
cufflinks 0.569        
cufflinks 1.873        
cufflinks 1.638        
cufflinks 1.757        
cufflinks 1.863        
cufflinks 0.614        
cufflinks 0.5        
cufflinks 2.73        
cufflinks 0.069     Low Low
cufflinks 0.052       Low
cufflinks 2.655        
cufflinks 0.242        
cufflinks 4.273       High
cufflinks 1.197        
cufflinks 0.042     Low Low
cufflinks 0.681        
cufflinks 2.664        
cufflinks 2.894        
cufflinks 0.039     Low Low
cufflinks 0.185        
cufflinks 0.867        
cufflinks 4.401       High

0 Strain