Gene : Pp3c14_17150 P. patens v3.3
Defline:  (1 of 4) KOG4585 - Predicted transposase Genomic Order:  853
Name:  ? Pp3c14_17150 Secondary Identifier:  ? PAC:32962977
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

12 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c14_17150 0.5kb upstream 0.5kb upstream 2925 true Chr14: 11188580-11191504 Physcomitrium patens
Pp3c14_17150 0.5kb upstream 0.5kb upstream 500 false Chr14: 11191005-11191504 Physcomitrium patens
Pp3c14_17150 0.5kb downstream 0.5kb downstream 2925 true Chr14: 11188080-11191004 Physcomitrium patens
Pp3c14_17150 0.5kb downstream 0.5kb downstream 500 false Chr14: 11188080-11188579 Physcomitrium patens
Pp3c14_17150 1.0kb upstream 1.0kb upstream 3425 true Chr14: 11188580-11192004 Physcomitrium patens
Pp3c14_17150 1.0kb upstream 1.0kb upstream 1000 false Chr14: 11191005-11192004 Physcomitrium patens
Pp3c14_17150 1.0kb downstream 1.0kb downstream 3425 true Chr14: 11187580-11191004 Physcomitrium patens
Pp3c14_17150 1.0kb downstream 1.0kb downstream 1000 false Chr14: 11187580-11188579 Physcomitrium patens
Pp3c14_17150 2.0kb upstream 2.0kb upstream 4425 true Chr14: 11188580-11193004 Physcomitrium patens
Pp3c14_17150 2.0kb upstream 2.0kb upstream 2000 false Chr14: 11191005-11193004 Physcomitrium patens
Pp3c14_17150 2.0kb downstream 2.0kb downstream 4425 true Chr14: 11186580-11191004 Physcomitrium patens
Pp3c14_17150 2.0kb downstream 2.0kb downstream 2000 false Chr14: 11186580-11188579 Physcomitrium patens
Pp3c14_17150 5.0kb upstream 5.0kb upstream 7425 true Chr14: 11188580-11196004 Physcomitrium patens
Pp3c14_17150 5.0kb upstream 5.0kb upstream 5000 false Chr14: 11191005-11196004 Physcomitrium patens
Pp3c14_17150 5.0kb downstream 5.0kb downstream 7425 true Chr14: 11183580-11191004 Physcomitrium patens
Pp3c14_17150 5.0kb downstream 5.0kb downstream 5000 false Chr14: 11183580-11188579 Physcomitrium patens
Pp3c14_17150 10.0kb upstream 10.0kb upstream 12425 true Chr14: 11188580-11201004 Physcomitrium patens
Pp3c14_17150 10.0kb upstream 10.0kb upstream 10000 false Chr14: 11191005-11201004 Physcomitrium patens
Pp3c14_17150 10.0kb downstream 10.0kb downstream 12425 true Chr14: 11178580-11191004 Physcomitrium patens
Pp3c14_17150 10.0kb downstream 10.0kb downstream 10000 false Chr14: 11178580-11188579 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121345285 5274 Embryophyte View MSA
123380187 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.732       Low
cufflinks 1.324        
cufflinks 1.126        
cufflinks 1.231        
cufflinks 1.44        
cufflinks 1.303        
cufflinks 1.312        
cufflinks 1.314        
cufflinks 1.412        
cufflinks 1.142        
cufflinks 1.436        
cufflinks 1.352        
cufflinks 1.244        
cufflinks 0.332       Low
cufflinks 1.264        
cufflinks 1.351        
cufflinks 1.718       High
cufflinks 1.132        
cufflinks 0.387       Low
cufflinks 1.192        
cufflinks 1.015        
cufflinks 0.381       Low
cufflinks 1.412        
cufflinks 0.745        
cufflinks 1.118        
cufflinks 1.307        
cufflinks 1.147        
cufflinks 1.397        
cufflinks 1.221        
cufflinks 1.968       High

0 Strain