Gene : Pp3c14_11760 P. patens v3.3
Defline:  (1 of 2) 1.1.1.14 - L-iditol 2-dehydrogenase / Sorbitol dehydrogenase Genomic Order:  594
Name:  ? Pp3c14_11760 Secondary Identifier:  ? PAC:32961047
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

6 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c14_11760 0.5kb upstream 0.5kb upstream 4086 true Chr14: 7445315-7449400 Physcomitrium patens
Pp3c14_11760 0.5kb upstream 0.5kb upstream 500 false Chr14: 7448901-7449400 Physcomitrium patens
Pp3c14_11760 0.5kb downstream 0.5kb downstream 4086 true Chr14: 7444815-7448900 Physcomitrium patens
Pp3c14_11760 0.5kb downstream 0.5kb downstream 500 false Chr14: 7444815-7445314 Physcomitrium patens
Pp3c14_11760 1.0kb upstream 1.0kb upstream 4586 true Chr14: 7445315-7449900 Physcomitrium patens
Pp3c14_11760 1.0kb upstream 1.0kb upstream 1000 false Chr14: 7448901-7449900 Physcomitrium patens
Pp3c14_11760 1.0kb downstream 1.0kb downstream 4586 true Chr14: 7444315-7448900 Physcomitrium patens
Pp3c14_11760 1.0kb downstream 1.0kb downstream 1000 false Chr14: 7444315-7445314 Physcomitrium patens
Pp3c14_11760 2.0kb upstream 2.0kb upstream 5586 true Chr14: 7445315-7450900 Physcomitrium patens
Pp3c14_11760 2.0kb upstream 2.0kb upstream 2000 false Chr14: 7448901-7450900 Physcomitrium patens
Pp3c14_11760 2.0kb downstream 2.0kb downstream 5586 true Chr14: 7443315-7448900 Physcomitrium patens
Pp3c14_11760 2.0kb downstream 2.0kb downstream 2000 false Chr14: 7443315-7445314 Physcomitrium patens
Pp3c14_11760 5.0kb upstream 5.0kb upstream 8586 true Chr14: 7445315-7453900 Physcomitrium patens
Pp3c14_11760 5.0kb upstream 5.0kb upstream 5000 false Chr14: 7448901-7453900 Physcomitrium patens
Pp3c14_11760 5.0kb downstream 5.0kb downstream 8586 true Chr14: 7440315-7448900 Physcomitrium patens
Pp3c14_11760 5.0kb downstream 5.0kb downstream 5000 false Chr14: 7440315-7445314 Physcomitrium patens
Pp3c14_11760 10.0kb upstream 10.0kb upstream 13586 true Chr14: 7445315-7458900 Physcomitrium patens
Pp3c14_11760 10.0kb upstream 10.0kb upstream 10000 false Chr14: 7448901-7458900 Physcomitrium patens
Pp3c14_11760 10.0kb downstream 10.0kb downstream 13586 true Chr14: 7435315-7448900 Physcomitrium patens
Pp3c14_11760 10.0kb downstream 10.0kb downstream 10000 false Chr14: 7435315-7445314 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121345697 5274 Embryophyte View MSA
123428625 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.972        
cufflinks 2.806       Low
cufflinks 3.409        
cufflinks 6.677        
cufflinks 2.207       Low
cufflinks 6.364        
cufflinks 2.019       Low
cufflinks 6.424        
cufflinks 10.663       High
cufflinks 5.194        
cufflinks 11.503       High
cufflinks 5.71        
cufflinks 4.041        
cufflinks 5.934        
cufflinks 9.772       High
cufflinks 5.425        
cufflinks 5.481        
cufflinks 4.957        
cufflinks 13.891       High
cufflinks 3.266        
cufflinks 6.529        
cufflinks 6.927        
cufflinks 27.766     High High
cufflinks 5.95        
cufflinks 3.435        
cufflinks 9.738       High
cufflinks 9.099        
cufflinks 3.387        
cufflinks 5.388        
cufflinks 4.27        

0 Strain