Gene : Pp3c14_15750 P. patens v3.3
Defline:  (1 of 7) PF09366 - Protein of unknown function (DUF1997) (DUF1997) Genomic Order:  801
Name:  ? Pp3c14_15750 Secondary Identifier:  ? PAC:32960263
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

6 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c14_15750 0.5kb upstream 0.5kb upstream 1113 true Chr14: 9999126-10000238 Physcomitrium patens
Pp3c14_15750 0.5kb upstream 0.5kb upstream 500 false Chr14: 9999739-10000238 Physcomitrium patens
Pp3c14_15750 0.5kb downstream 0.5kb downstream 1113 true Chr14: 9998626-9999738 Physcomitrium patens
Pp3c14_15750 0.5kb downstream 0.5kb downstream 500 false Chr14: 9998626-9999125 Physcomitrium patens
Pp3c14_15750 1.0kb upstream 1.0kb upstream 1613 true Chr14: 9999126-10000738 Physcomitrium patens
Pp3c14_15750 1.0kb upstream 1.0kb upstream 1000 false Chr14: 9999739-10000738 Physcomitrium patens
Pp3c14_15750 1.0kb downstream 1.0kb downstream 1613 true Chr14: 9998126-9999738 Physcomitrium patens
Pp3c14_15750 1.0kb downstream 1.0kb downstream 1000 false Chr14: 9998126-9999125 Physcomitrium patens
Pp3c14_15750 2.0kb upstream 2.0kb upstream 2613 true Chr14: 9999126-10001738 Physcomitrium patens
Pp3c14_15750 2.0kb upstream 2.0kb upstream 2000 false Chr14: 9999739-10001738 Physcomitrium patens
Pp3c14_15750 2.0kb downstream 2.0kb downstream 2613 true Chr14: 9997126-9999738 Physcomitrium patens
Pp3c14_15750 2.0kb downstream 2.0kb downstream 2000 false Chr14: 9997126-9999125 Physcomitrium patens
Pp3c14_15750 5.0kb upstream 5.0kb upstream 5613 true Chr14: 9999126-10004738 Physcomitrium patens
Pp3c14_15750 5.0kb upstream 5.0kb upstream 5000 false Chr14: 9999739-10004738 Physcomitrium patens
Pp3c14_15750 5.0kb downstream 5.0kb downstream 5613 true Chr14: 9994126-9999738 Physcomitrium patens
Pp3c14_15750 5.0kb downstream 5.0kb downstream 5000 false Chr14: 9994126-9999125 Physcomitrium patens
Pp3c14_15750 10.0kb upstream 10.0kb upstream 10613 true Chr14: 9999126-10009738 Physcomitrium patens
Pp3c14_15750 10.0kb upstream 10.0kb upstream 10000 false Chr14: 9999739-10009738 Physcomitrium patens
Pp3c14_15750 10.0kb downstream 10.0kb downstream 10613 true Chr14: 9989126-9999738 Physcomitrium patens
Pp3c14_15750 10.0kb downstream 10.0kb downstream 10000 false Chr14: 9989126-9999125 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121332903 5274 Embryophyte Singleton cluster - no MSA
123369806 5275 Viridiplantae Singleton cluster - no MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.005     Low  
cufflinks 0.004     Low  
cufflinks 0.003     Low  
cufflinks 0.003     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.014     Low High
cufflinks 0.002     Low Low
cufflinks 0.003     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.005     Low  
cufflinks 0.011     Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.002     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.008     Low  
cufflinks 0.004     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain