Gene : Pp3c14_2450 P. patens v3.3
Defline:  (1 of 1) PTHR13077:SF6 - 15 KDA SELENOPROTEIN Genomic Order:  85
Name:  ? Pp3c14_2450 Secondary Identifier:  ? PAC:32959915
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

9 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c14_2450 0.5kb upstream 0.5kb upstream 2543 true Chr14: 1713744-1716286 Physcomitrium patens
Pp3c14_2450 0.5kb upstream 0.5kb upstream 500 false Chr14: 1715787-1716286 Physcomitrium patens
Pp3c14_2450 0.5kb downstream 0.5kb downstream 2543 true Chr14: 1713244-1715786 Physcomitrium patens
Pp3c14_2450 0.5kb downstream 0.5kb downstream 500 false Chr14: 1713244-1713743 Physcomitrium patens
Pp3c14_2450 1.0kb upstream 1.0kb upstream 3043 true Chr14: 1713744-1716786 Physcomitrium patens
Pp3c14_2450 1.0kb upstream 1.0kb upstream 1000 false Chr14: 1715787-1716786 Physcomitrium patens
Pp3c14_2450 1.0kb downstream 1.0kb downstream 3043 true Chr14: 1712744-1715786 Physcomitrium patens
Pp3c14_2450 1.0kb downstream 1.0kb downstream 1000 false Chr14: 1712744-1713743 Physcomitrium patens
Pp3c14_2450 2.0kb upstream 2.0kb upstream 4043 true Chr14: 1713744-1717786 Physcomitrium patens
Pp3c14_2450 2.0kb upstream 2.0kb upstream 2000 false Chr14: 1715787-1717786 Physcomitrium patens
Pp3c14_2450 2.0kb downstream 2.0kb downstream 4043 true Chr14: 1711744-1715786 Physcomitrium patens
Pp3c14_2450 2.0kb downstream 2.0kb downstream 2000 false Chr14: 1711744-1713743 Physcomitrium patens
Pp3c14_2450 5.0kb upstream 5.0kb upstream 7043 true Chr14: 1713744-1720786 Physcomitrium patens
Pp3c14_2450 5.0kb upstream 5.0kb upstream 5000 false Chr14: 1715787-1720786 Physcomitrium patens
Pp3c14_2450 5.0kb downstream 5.0kb downstream 7043 true Chr14: 1708744-1715786 Physcomitrium patens
Pp3c14_2450 5.0kb downstream 5.0kb downstream 5000 false Chr14: 1708744-1713743 Physcomitrium patens
Pp3c14_2450 10.0kb upstream 10.0kb upstream 12043 true Chr14: 1713744-1725786 Physcomitrium patens
Pp3c14_2450 10.0kb upstream 10.0kb upstream 10000 false Chr14: 1715787-1725786 Physcomitrium patens
Pp3c14_2450 10.0kb downstream 10.0kb downstream 12043 true Chr14: 1703744-1715786 Physcomitrium patens
Pp3c14_2450 10.0kb downstream 10.0kb downstream 10000 false Chr14: 1703744-1713743 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121346057 5274 Embryophyte View MSA
123424520 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.566        
cufflinks 3.522        
cufflinks 4.379        
cufflinks 7.293       High
cufflinks 6.612       High
cufflinks 4.224        
cufflinks 6.865       High
cufflinks 3.972        
cufflinks 5.298        
cufflinks 5.994       High
cufflinks 4.397        
cufflinks 3.601        
cufflinks 3.324        
cufflinks 3.08       Low
cufflinks 4.429        
cufflinks 4.333        
cufflinks 5.603        
cufflinks 3.966        
cufflinks 2.621       Low
cufflinks 4.275        
cufflinks 3.527        
cufflinks 2.941       Low
cufflinks 4.868        
cufflinks 3.164       Low
cufflinks 3.746        
cufflinks 3.105       Low
cufflinks 5.383        
cufflinks 4.132        
cufflinks 3.782        
cufflinks 3.906        

0 Strain