Gene : Pp3c14_24820 P. patens v3.3
Genomic Order:  1240 Name:  ? Pp3c14_24820
Secondary Identifier:  ? PAC:32960425
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c14_24820 0.5kb upstream 0.5kb upstream 7293 true Chr14: 15847575-15854867 Physcomitrium patens
Pp3c14_24820 0.5kb upstream 0.5kb upstream 500 false Chr14: 15847575-15848074 Physcomitrium patens
Pp3c14_24820 0.5kb downstream 0.5kb downstream 7293 true Chr14: 15848075-15855367 Physcomitrium patens
Pp3c14_24820 0.5kb downstream 0.5kb downstream 500 false Chr14: 15854868-15855367 Physcomitrium patens
Pp3c14_24820 1.0kb upstream 1.0kb upstream 7793 true Chr14: 15847075-15854867 Physcomitrium patens
Pp3c14_24820 1.0kb upstream 1.0kb upstream 1000 false Chr14: 15847075-15848074 Physcomitrium patens
Pp3c14_24820 1.0kb downstream 1.0kb downstream 7793 true Chr14: 15848075-15855867 Physcomitrium patens
Pp3c14_24820 1.0kb downstream 1.0kb downstream 1000 false Chr14: 15854868-15855867 Physcomitrium patens
Pp3c14_24820 2.0kb upstream 2.0kb upstream 8793 true Chr14: 15846075-15854867 Physcomitrium patens
Pp3c14_24820 2.0kb upstream 2.0kb upstream 2000 false Chr14: 15846075-15848074 Physcomitrium patens
Pp3c14_24820 2.0kb downstream 2.0kb downstream 8793 true Chr14: 15848075-15856867 Physcomitrium patens
Pp3c14_24820 2.0kb downstream 2.0kb downstream 2000 false Chr14: 15854868-15856867 Physcomitrium patens
Pp3c14_24820 5.0kb upstream 5.0kb upstream 11793 true Chr14: 15843075-15854867 Physcomitrium patens
Pp3c14_24820 5.0kb upstream 5.0kb upstream 5000 false Chr14: 15843075-15848074 Physcomitrium patens
Pp3c14_24820 5.0kb downstream 5.0kb downstream 11793 true Chr14: 15848075-15859867 Physcomitrium patens
Pp3c14_24820 5.0kb downstream 5.0kb downstream 5000 false Chr14: 15854868-15859867 Physcomitrium patens
Pp3c14_24820 10.0kb upstream 10.0kb upstream 16793 true Chr14: 15838075-15854867 Physcomitrium patens
Pp3c14_24820 10.0kb upstream 10.0kb upstream 10000 false Chr14: 15838075-15848074 Physcomitrium patens
Pp3c14_24820 10.0kb downstream 10.0kb downstream 16793 true Chr14: 15848075-15864867 Physcomitrium patens
Pp3c14_24820 10.0kb downstream 10.0kb downstream 10000 false Chr14: 15854868-15864867 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121348970 5274 Embryophyte View MSA
123381106 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.286       Low
cufflinks 2.523       Low
cufflinks 6.463        
cufflinks 9.489        
cufflinks 4.352        
cufflinks 7.669        
cufflinks 6.749        
cufflinks 8.415        
cufflinks 13.942       High
cufflinks 7.31        
cufflinks 18.265     High High
cufflinks 6.359        
cufflinks 8.744        
cufflinks 4.793        
cufflinks 5.744        
cufflinks 6.299        
cufflinks 6.393        
cufflinks 6.815        
cufflinks 13.273       High
cufflinks 4.695        
cufflinks 14.741     High High
cufflinks 6.169        
cufflinks 11.587       High
cufflinks 13.078       High
cufflinks 6.505        
cufflinks 8.3        
cufflinks 3.821       Low
cufflinks 3.37       Low
cufflinks 6.323        
cufflinks 6.258        

0 Strain