Gene : Pp3c14_26183 P. patens v3.3
Defline:  (1 of 3) PF05553 - Cotton fibre expressed protein (DUF761) Genomic Order:  1298
Name:  ? Pp3c14_26183 Secondary Identifier:  ? PAC:32962254
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c14_26183 0.5kb upstream 0.5kb upstream 4080 true Chr14: 16787779-16791858 Physcomitrium patens
Pp3c14_26183 0.5kb upstream 0.5kb upstream 500 false Chr14: 16791359-16791858 Physcomitrium patens
Pp3c14_26183 0.5kb downstream 0.5kb downstream 4080 true Chr14: 16787279-16791358 Physcomitrium patens
Pp3c14_26183 0.5kb downstream 0.5kb downstream 500 false Chr14: 16787279-16787778 Physcomitrium patens
Pp3c14_26183 1.0kb upstream 1.0kb upstream 4580 true Chr14: 16787779-16792358 Physcomitrium patens
Pp3c14_26183 1.0kb upstream 1.0kb upstream 1000 false Chr14: 16791359-16792358 Physcomitrium patens
Pp3c14_26183 1.0kb downstream 1.0kb downstream 4580 true Chr14: 16786779-16791358 Physcomitrium patens
Pp3c14_26183 1.0kb downstream 1.0kb downstream 1000 false Chr14: 16786779-16787778 Physcomitrium patens
Pp3c14_26183 2.0kb upstream 2.0kb upstream 5580 true Chr14: 16787779-16793358 Physcomitrium patens
Pp3c14_26183 2.0kb upstream 2.0kb upstream 2000 false Chr14: 16791359-16793358 Physcomitrium patens
Pp3c14_26183 2.0kb downstream 2.0kb downstream 5580 true Chr14: 16785779-16791358 Physcomitrium patens
Pp3c14_26183 2.0kb downstream 2.0kb downstream 2000 false Chr14: 16785779-16787778 Physcomitrium patens
Pp3c14_26183 5.0kb upstream 5.0kb upstream 8580 true Chr14: 16787779-16796358 Physcomitrium patens
Pp3c14_26183 5.0kb upstream 5.0kb upstream 5000 false Chr14: 16791359-16796358 Physcomitrium patens
Pp3c14_26183 5.0kb downstream 5.0kb downstream 8580 true Chr14: 16782779-16791358 Physcomitrium patens
Pp3c14_26183 5.0kb downstream 5.0kb downstream 5000 false Chr14: 16782779-16787778 Physcomitrium patens
Pp3c14_26183 10.0kb upstream 10.0kb upstream 13580 true Chr14: 16787779-16801358 Physcomitrium patens
Pp3c14_26183 10.0kb upstream 10.0kb upstream 10000 false Chr14: 16791359-16801358 Physcomitrium patens
Pp3c14_26183 10.0kb downstream 10.0kb downstream 13580 true Chr14: 16777779-16791358 Physcomitrium patens
Pp3c14_26183 10.0kb downstream 10.0kb downstream 10000 false Chr14: 16777779-16787778 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121343638 5274 Embryophyte View MSA
123379810 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain