Gene : Pp3c14_26240 P. patens v3.3
Defline:  (1 of 2) PTHR12952 - SYS1 Genomic Order:  1302
Name:  ? Pp3c14_26240 Secondary Identifier:  ? PAC:32963267
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

6 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c14_26240 0.5kb upstream 0.5kb upstream 3345 true Chr14: 16821553-16824897 Physcomitrium patens
Pp3c14_26240 0.5kb upstream 0.5kb upstream 500 false Chr14: 16821553-16822052 Physcomitrium patens
Pp3c14_26240 0.5kb downstream 0.5kb downstream 3345 true Chr14: 16822053-16825397 Physcomitrium patens
Pp3c14_26240 0.5kb downstream 0.5kb downstream 500 false Chr14: 16824898-16825397 Physcomitrium patens
Pp3c14_26240 1.0kb upstream 1.0kb upstream 3845 true Chr14: 16821053-16824897 Physcomitrium patens
Pp3c14_26240 1.0kb upstream 1.0kb upstream 1000 false Chr14: 16821053-16822052 Physcomitrium patens
Pp3c14_26240 1.0kb downstream 1.0kb downstream 3845 true Chr14: 16822053-16825897 Physcomitrium patens
Pp3c14_26240 1.0kb downstream 1.0kb downstream 1000 false Chr14: 16824898-16825897 Physcomitrium patens
Pp3c14_26240 2.0kb upstream 2.0kb upstream 4845 true Chr14: 16820053-16824897 Physcomitrium patens
Pp3c14_26240 2.0kb upstream 2.0kb upstream 2000 false Chr14: 16820053-16822052 Physcomitrium patens
Pp3c14_26240 2.0kb downstream 2.0kb downstream 4845 true Chr14: 16822053-16826897 Physcomitrium patens
Pp3c14_26240 2.0kb downstream 2.0kb downstream 2000 false Chr14: 16824898-16826897 Physcomitrium patens
Pp3c14_26240 5.0kb upstream 5.0kb upstream 7845 true Chr14: 16817053-16824897 Physcomitrium patens
Pp3c14_26240 5.0kb upstream 5.0kb upstream 5000 false Chr14: 16817053-16822052 Physcomitrium patens
Pp3c14_26240 5.0kb downstream 5.0kb downstream 7845 true Chr14: 16822053-16829897 Physcomitrium patens
Pp3c14_26240 5.0kb downstream 5.0kb downstream 5000 false Chr14: 16824898-16829897 Physcomitrium patens
Pp3c14_26240 10.0kb upstream 10.0kb upstream 12845 true Chr14: 16812053-16824897 Physcomitrium patens
Pp3c14_26240 10.0kb upstream 10.0kb upstream 10000 false Chr14: 16812053-16822052 Physcomitrium patens
Pp3c14_26240 10.0kb downstream 10.0kb downstream 12845 true Chr14: 16822053-16834897 Physcomitrium patens
Pp3c14_26240 10.0kb downstream 10.0kb downstream 10000 false Chr14: 16824898-16834897 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121345746 5274 Embryophyte View MSA
123428394 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.929        
cufflinks 7.588       Low
cufflinks 13.035        
cufflinks 13.297        
cufflinks 22.321     High High
cufflinks 22.252     High High
cufflinks 3.691       Low
cufflinks 14.926        
cufflinks 22.407     High High
cufflinks 9.868        
cufflinks 15.132        
cufflinks 19.062        
cufflinks 3.803       Low
cufflinks 16.565        
cufflinks 11.124        
cufflinks 20.163     High  
cufflinks 14.571        
cufflinks 16.855        
cufflinks 18.087        
cufflinks 16.579        
cufflinks 15.24        
cufflinks 8.407       Low
cufflinks 16.876        
cufflinks 24.677     High High
cufflinks 16.034        
cufflinks 19.421        
cufflinks 11.461        
cufflinks 16.146        
cufflinks 14.452        
cufflinks 16.506        

0 Strain