Gene : Pp3c14_20010 P. patens v3.3
Defline:  (1 of 4) PTHR11214:SF74 - BETA-1,3-GALACTOSYLTRANSFERASE 7-RELATED Genomic Order:  980
Name:  ? Pp3c14_20010 Secondary Identifier:  ? PAC:32962484
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

8 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c14_20010 0.5kb upstream 0.5kb upstream 3992 true Chr14: 13107407-13111398 Physcomitrium patens
Pp3c14_20010 0.5kb upstream 0.5kb upstream 500 false Chr14: 13110899-13111398 Physcomitrium patens
Pp3c14_20010 0.5kb downstream 0.5kb downstream 3992 true Chr14: 13106907-13110898 Physcomitrium patens
Pp3c14_20010 0.5kb downstream 0.5kb downstream 500 false Chr14: 13106907-13107406 Physcomitrium patens
Pp3c14_20010 1.0kb upstream 1.0kb upstream 4492 true Chr14: 13107407-13111898 Physcomitrium patens
Pp3c14_20010 1.0kb upstream 1.0kb upstream 1000 false Chr14: 13110899-13111898 Physcomitrium patens
Pp3c14_20010 1.0kb downstream 1.0kb downstream 4492 true Chr14: 13106407-13110898 Physcomitrium patens
Pp3c14_20010 1.0kb downstream 1.0kb downstream 1000 false Chr14: 13106407-13107406 Physcomitrium patens
Pp3c14_20010 2.0kb upstream 2.0kb upstream 5492 true Chr14: 13107407-13112898 Physcomitrium patens
Pp3c14_20010 2.0kb upstream 2.0kb upstream 2000 false Chr14: 13110899-13112898 Physcomitrium patens
Pp3c14_20010 2.0kb downstream 2.0kb downstream 5492 true Chr14: 13105407-13110898 Physcomitrium patens
Pp3c14_20010 2.0kb downstream 2.0kb downstream 2000 false Chr14: 13105407-13107406 Physcomitrium patens
Pp3c14_20010 5.0kb upstream 5.0kb upstream 8492 true Chr14: 13107407-13115898 Physcomitrium patens
Pp3c14_20010 5.0kb upstream 5.0kb upstream 5000 false Chr14: 13110899-13115898 Physcomitrium patens
Pp3c14_20010 5.0kb downstream 5.0kb downstream 8492 true Chr14: 13102407-13110898 Physcomitrium patens
Pp3c14_20010 5.0kb downstream 5.0kb downstream 5000 false Chr14: 13102407-13107406 Physcomitrium patens
Pp3c14_20010 10.0kb upstream 10.0kb upstream 13492 true Chr14: 13107407-13120898 Physcomitrium patens
Pp3c14_20010 10.0kb upstream 10.0kb upstream 10000 false Chr14: 13110899-13120898 Physcomitrium patens
Pp3c14_20010 10.0kb downstream 10.0kb downstream 13492 true Chr14: 13097407-13110898 Physcomitrium patens
Pp3c14_20010 10.0kb downstream 10.0kb downstream 10000 false Chr14: 13097407-13107406 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121349235 5274 Embryophyte View MSA
123381228 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.267        
cufflinks 12.156       High
cufflinks 12.736       High
cufflinks 2.336        
cufflinks 3.927        
cufflinks 2.072        
cufflinks 4.714        
cufflinks 2.178        
cufflinks 2.59        
cufflinks 3.933        
cufflinks 3.055        
cufflinks 3.256        
cufflinks 1.943        
cufflinks 0.936       Low
cufflinks 2.772        
cufflinks 32.483     High High
cufflinks 3.734        
cufflinks 1.707       Low
cufflinks 2.975        
cufflinks 32.109     High High
cufflinks 9.024        
cufflinks 3.483        
cufflinks 31.139     High High
cufflinks 5.167        
cufflinks 1.515       Low
cufflinks 2.099        
cufflinks 14.983       High
cufflinks 5.787        
cufflinks 1.778       Low
cufflinks 4.779        

0 Strain