Gene : Pp3c14_2260 P. patens v3.3
Defline:  (1 of 1) PTHR23084//PTHR23084:SF155 - PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE RELATED Genomic Order:  77
Name:  ? Pp3c14_2260 Secondary Identifier:  ? PAC:32962739
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

9 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c14_2260 0.5kb upstream 0.5kb upstream 6751 true Chr14: 1602788-1609538 Physcomitrium patens
Pp3c14_2260 0.5kb upstream 0.5kb upstream 500 false Chr14: 1602788-1603287 Physcomitrium patens
Pp3c14_2260 0.5kb downstream 0.5kb downstream 6751 true Chr14: 1603288-1610038 Physcomitrium patens
Pp3c14_2260 0.5kb downstream 0.5kb downstream 500 false Chr14: 1609539-1610038 Physcomitrium patens
Pp3c14_2260 1.0kb upstream 1.0kb upstream 7251 true Chr14: 1602288-1609538 Physcomitrium patens
Pp3c14_2260 1.0kb upstream 1.0kb upstream 1000 false Chr14: 1602288-1603287 Physcomitrium patens
Pp3c14_2260 1.0kb downstream 1.0kb downstream 7251 true Chr14: 1603288-1610538 Physcomitrium patens
Pp3c14_2260 1.0kb downstream 1.0kb downstream 1000 false Chr14: 1609539-1610538 Physcomitrium patens
Pp3c14_2260 2.0kb upstream 2.0kb upstream 8251 true Chr14: 1601288-1609538 Physcomitrium patens
Pp3c14_2260 2.0kb upstream 2.0kb upstream 2000 false Chr14: 1601288-1603287 Physcomitrium patens
Pp3c14_2260 2.0kb downstream 2.0kb downstream 8251 true Chr14: 1603288-1611538 Physcomitrium patens
Pp3c14_2260 2.0kb downstream 2.0kb downstream 2000 false Chr14: 1609539-1611538 Physcomitrium patens
Pp3c14_2260 5.0kb upstream 5.0kb upstream 11251 true Chr14: 1598288-1609538 Physcomitrium patens
Pp3c14_2260 5.0kb upstream 5.0kb upstream 5000 false Chr14: 1598288-1603287 Physcomitrium patens
Pp3c14_2260 5.0kb downstream 5.0kb downstream 11251 true Chr14: 1603288-1614538 Physcomitrium patens
Pp3c14_2260 5.0kb downstream 5.0kb downstream 5000 false Chr14: 1609539-1614538 Physcomitrium patens
Pp3c14_2260 10.0kb upstream 10.0kb upstream 16251 true Chr14: 1593288-1609538 Physcomitrium patens
Pp3c14_2260 10.0kb upstream 10.0kb upstream 10000 false Chr14: 1593288-1603287 Physcomitrium patens
Pp3c14_2260 10.0kb downstream 10.0kb downstream 16251 true Chr14: 1603288-1619538 Physcomitrium patens
Pp3c14_2260 10.0kb downstream 10.0kb downstream 10000 false Chr14: 1609539-1619538 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121347231 5274 Embryophyte View MSA
123380514 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 81.106     High  
cufflinks 51.93     High  
cufflinks 66.464     High  
cufflinks 6.556       Low
cufflinks 65.838     High  
cufflinks 8.96       Low
cufflinks 48.453     High  
cufflinks 52.071     High  
cufflinks 51.746     High  
cufflinks 7.195       Low
cufflinks 48.042     High  
cufflinks 70.032     High  
cufflinks 62.998     High  
cufflinks 38.997     High  
cufflinks 32.737     High  
cufflinks 38.947     High  
cufflinks 61.482     High  
cufflinks 60.911     High  
cufflinks 63.147     High  
cufflinks 95.479     High High
cufflinks 44.275     High  
cufflinks 47.551     High  
cufflinks 76.344     High  
cufflinks 42.751     High  
cufflinks 63.154     High  
cufflinks 101.943     High High
cufflinks 29.111     High  
cufflinks 29.804     High  
cufflinks 10.029       Low
cufflinks 18.15        

0 Strain