Gene : Pp3c15_21680 P. patens v3.3
Defline:  (1 of 1) PTHR11751//PTHR11751:SF435 - SUBGROUP I AMINOTRANSFERASE RELATED Genomic Order:  980
Name:  ? Pp3c15_21680 Secondary Identifier:  ? PAC:32929557
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ppatens PWY-43 Physcomitrium patens pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

8 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c15_21680 0.5kb upstream 0.5kb upstream 3514 true Chr15: 14047865-14051378 Physcomitrium patens
Pp3c15_21680 0.5kb upstream 0.5kb upstream 500 false Chr15: 14047865-14048364 Physcomitrium patens
Pp3c15_21680 0.5kb downstream 0.5kb downstream 3514 true Chr15: 14048365-14051878 Physcomitrium patens
Pp3c15_21680 0.5kb downstream 0.5kb downstream 500 false Chr15: 14051379-14051878 Physcomitrium patens
Pp3c15_21680 1.0kb upstream 1.0kb upstream 4014 true Chr15: 14047365-14051378 Physcomitrium patens
Pp3c15_21680 1.0kb upstream 1.0kb upstream 1000 false Chr15: 14047365-14048364 Physcomitrium patens
Pp3c15_21680 1.0kb downstream 1.0kb downstream 4014 true Chr15: 14048365-14052378 Physcomitrium patens
Pp3c15_21680 1.0kb downstream 1.0kb downstream 1000 false Chr15: 14051379-14052378 Physcomitrium patens
Pp3c15_21680 2.0kb upstream 2.0kb upstream 5014 true Chr15: 14046365-14051378 Physcomitrium patens
Pp3c15_21680 2.0kb upstream 2.0kb upstream 2000 false Chr15: 14046365-14048364 Physcomitrium patens
Pp3c15_21680 2.0kb downstream 2.0kb downstream 5014 true Chr15: 14048365-14053378 Physcomitrium patens
Pp3c15_21680 2.0kb downstream 2.0kb downstream 2000 false Chr15: 14051379-14053378 Physcomitrium patens
Pp3c15_21680 5.0kb upstream 5.0kb upstream 8014 true Chr15: 14043365-14051378 Physcomitrium patens
Pp3c15_21680 5.0kb upstream 5.0kb upstream 5000 false Chr15: 14043365-14048364 Physcomitrium patens
Pp3c15_21680 5.0kb downstream 5.0kb downstream 8014 true Chr15: 14048365-14056378 Physcomitrium patens
Pp3c15_21680 5.0kb downstream 5.0kb downstream 5000 false Chr15: 14051379-14056378 Physcomitrium patens
Pp3c15_21680 10.0kb upstream 10.0kb upstream 13014 true Chr15: 14038365-14051378 Physcomitrium patens
Pp3c15_21680 10.0kb upstream 10.0kb upstream 10000 false Chr15: 14038365-14048364 Physcomitrium patens
Pp3c15_21680 10.0kb downstream 10.0kb downstream 13014 true Chr15: 14048365-14061378 Physcomitrium patens
Pp3c15_21680 10.0kb downstream 10.0kb downstream 10000 false Chr15: 14051379-14061378 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121348486 5274 Embryophyte View MSA
123425712 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.108        
cufflinks 0.183       High
cufflinks 0.029     Low Low
cufflinks 0.106     Low  
cufflinks 0.192       High
cufflinks 0.118        
cufflinks 0.15        
cufflinks 0.161        
cufflinks 0.207       High
cufflinks 0.091     Low  
cufflinks 0.077        
cufflinks 0.105        
cufflinks 0.108        
cufflinks 0.139        
cufflinks 0.138        
cufflinks 0.157        
cufflinks 0.031     Low Low
cufflinks 0.026     Low Low
cufflinks 0.128        
cufflinks 0.135        
cufflinks 0.15        
cufflinks 0.137        
cufflinks 0.111        
cufflinks 0.141        
cufflinks 0.141        
cufflinks 0.028     Low Low
cufflinks 0.097        
cufflinks 0.116        
cufflinks 0.105        
cufflinks 0.089        

0 Strain