Gene : Pp3c16_14810 P. patens v3.3
Defline:  (1 of 2) PF00072//PF00512//PF02518//PF08447 - Response regulator receiver domain (Response_reg) // His Kinase A (phospho-acceptor) domain (HisKA) // Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) // PAS fold (PAS_3) Genomic Order:  773
Name:  ? Pp3c16_14810 Secondary Identifier:  ? PAC:32986239
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

8 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c16_14810 0.5kb upstream 0.5kb upstream 7313 true Chr16: 9255727-9263039 Physcomitrium patens
Pp3c16_14810 0.5kb upstream 0.5kb upstream 500 false Chr16: 9262540-9263039 Physcomitrium patens
Pp3c16_14810 0.5kb downstream 0.5kb downstream 7313 true Chr16: 9255227-9262539 Physcomitrium patens
Pp3c16_14810 0.5kb downstream 0.5kb downstream 500 false Chr16: 9255227-9255726 Physcomitrium patens
Pp3c16_14810 1.0kb upstream 1.0kb upstream 7813 true Chr16: 9255727-9263539 Physcomitrium patens
Pp3c16_14810 1.0kb upstream 1.0kb upstream 1000 false Chr16: 9262540-9263539 Physcomitrium patens
Pp3c16_14810 1.0kb downstream 1.0kb downstream 7813 true Chr16: 9254727-9262539 Physcomitrium patens
Pp3c16_14810 1.0kb downstream 1.0kb downstream 1000 false Chr16: 9254727-9255726 Physcomitrium patens
Pp3c16_14810 2.0kb upstream 2.0kb upstream 8813 true Chr16: 9255727-9264539 Physcomitrium patens
Pp3c16_14810 2.0kb upstream 2.0kb upstream 2000 false Chr16: 9262540-9264539 Physcomitrium patens
Pp3c16_14810 2.0kb downstream 2.0kb downstream 8813 true Chr16: 9253727-9262539 Physcomitrium patens
Pp3c16_14810 2.0kb downstream 2.0kb downstream 2000 false Chr16: 9253727-9255726 Physcomitrium patens
Pp3c16_14810 5.0kb upstream 5.0kb upstream 11813 true Chr16: 9255727-9267539 Physcomitrium patens
Pp3c16_14810 5.0kb upstream 5.0kb upstream 5000 false Chr16: 9262540-9267539 Physcomitrium patens
Pp3c16_14810 5.0kb downstream 5.0kb downstream 11813 true Chr16: 9250727-9262539 Physcomitrium patens
Pp3c16_14810 5.0kb downstream 5.0kb downstream 5000 false Chr16: 9250727-9255726 Physcomitrium patens
Pp3c16_14810 10.0kb upstream 10.0kb upstream 16813 true Chr16: 9255727-9272539 Physcomitrium patens
Pp3c16_14810 10.0kb upstream 10.0kb upstream 10000 false Chr16: 9262540-9272539 Physcomitrium patens
Pp3c16_14810 10.0kb downstream 10.0kb downstream 16813 true Chr16: 9245727-9262539 Physcomitrium patens
Pp3c16_14810 10.0kb downstream 10.0kb downstream 10000 false Chr16: 9245727-9255726 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121343221 5274 Embryophyte View MSA
123427331 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 62.063     High  
cufflinks 102.291     High High
cufflinks 41.561     High  
cufflinks 85.11     High  
cufflinks 47.451     High  
cufflinks 91.642     High  
cufflinks 59.69     High  
cufflinks 47.633     High  
cufflinks 20.503     High Low
cufflinks 94.844     High  
cufflinks 23.031     High  
cufflinks 16.328       Low
cufflinks 13.692       Low
cufflinks 16.585       Low
cufflinks 25.715     High  
cufflinks 74.349     High  
cufflinks 21.277     High Low
cufflinks 62.014     High  
cufflinks 110.623     High High
cufflinks 109.36     High High
cufflinks 70.919     High  
cufflinks 11.154       Low
cufflinks 81.92     High  
cufflinks 14.934     High Low
cufflinks 50.024     High  
cufflinks 100.713     High High
cufflinks 14.368     High Low
cufflinks 72.681     High  
cufflinks 103.642     High High
cufflinks 51.541     High  

0 Strain