Gene : Pp3c16_18710 P. patens v3.3
Genomic Order:  979 Name:  ? Pp3c16_18710
Secondary Identifier:  ? PAC:32984384
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

8 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c16_18710 0.5kb upstream 0.5kb upstream 5109 true Chr16: 11467814-11472922 Physcomitrium patens
Pp3c16_18710 0.5kb upstream 0.5kb upstream 500 false Chr16: 11467814-11468313 Physcomitrium patens
Pp3c16_18710 0.5kb downstream 0.5kb downstream 5109 true Chr16: 11468314-11473422 Physcomitrium patens
Pp3c16_18710 0.5kb downstream 0.5kb downstream 500 false Chr16: 11472923-11473422 Physcomitrium patens
Pp3c16_18710 1.0kb upstream 1.0kb upstream 5609 true Chr16: 11467314-11472922 Physcomitrium patens
Pp3c16_18710 1.0kb upstream 1.0kb upstream 1000 false Chr16: 11467314-11468313 Physcomitrium patens
Pp3c16_18710 1.0kb downstream 1.0kb downstream 5609 true Chr16: 11468314-11473922 Physcomitrium patens
Pp3c16_18710 1.0kb downstream 1.0kb downstream 1000 false Chr16: 11472923-11473922 Physcomitrium patens
Pp3c16_18710 2.0kb upstream 2.0kb upstream 6609 true Chr16: 11466314-11472922 Physcomitrium patens
Pp3c16_18710 2.0kb upstream 2.0kb upstream 2000 false Chr16: 11466314-11468313 Physcomitrium patens
Pp3c16_18710 2.0kb downstream 2.0kb downstream 6609 true Chr16: 11468314-11474922 Physcomitrium patens
Pp3c16_18710 2.0kb downstream 2.0kb downstream 2000 false Chr16: 11472923-11474922 Physcomitrium patens
Pp3c16_18710 5.0kb upstream 5.0kb upstream 9609 true Chr16: 11463314-11472922 Physcomitrium patens
Pp3c16_18710 5.0kb upstream 5.0kb upstream 5000 false Chr16: 11463314-11468313 Physcomitrium patens
Pp3c16_18710 5.0kb downstream 5.0kb downstream 9609 true Chr16: 11468314-11477922 Physcomitrium patens
Pp3c16_18710 5.0kb downstream 5.0kb downstream 5000 false Chr16: 11472923-11477922 Physcomitrium patens
Pp3c16_18710 10.0kb upstream 10.0kb upstream 14609 true Chr16: 11458314-11472922 Physcomitrium patens
Pp3c16_18710 10.0kb upstream 10.0kb upstream 10000 false Chr16: 11458314-11468313 Physcomitrium patens
Pp3c16_18710 10.0kb downstream 10.0kb downstream 14609 true Chr16: 11468314-11482922 Physcomitrium patens
Pp3c16_18710 10.0kb downstream 10.0kb downstream 10000 false Chr16: 11472923-11482922 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121335935 5274 Embryophyte Singleton cluster - no MSA
123372780 5275 Viridiplantae Singleton cluster - no MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 40.119     High  
cufflinks 44.724     High  
cufflinks 38.995     High  
cufflinks 85.725     High  
cufflinks 30.871     High  
cufflinks 82.731     High  
cufflinks 38.199     High  
cufflinks 0.653       Low
cufflinks 22.376     High  
cufflinks 32.406     High  
cufflinks 2.731       Low
cufflinks 214.075     High High
cufflinks 58.155     High  
cufflinks 122.219     High  
cufflinks 37.652     High  
cufflinks 25.952     High  
cufflinks 140.098     High  
cufflinks 39.542     High  
cufflinks 58.03     High  
cufflinks 6.241       Low
cufflinks 84.793     High  
cufflinks 1.951       Low
cufflinks 136.725     High  
cufflinks 113.649     High  
cufflinks 53.834     High  
cufflinks 36.052     High  
cufflinks 178.419     High High
cufflinks 97.291     High  
cufflinks 104.431     High  
cufflinks 7.453       Low

0 Strain