Gene : Pp3c16_24260 P. patens v3.3
Defline:  (1 of 3) PTHR14146 - EXOCYST COMPLEX COMPONENT 4 Genomic Order:  1210
Name:  ? Pp3c16_24260 Secondary Identifier:  ? PAC:32983920
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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9 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c16_24260 0.5kb upstream 0.5kb upstream 11918 true Chr16: 15166768-15178685 Physcomitrium patens
Pp3c16_24260 0.5kb upstream 0.5kb upstream 500 false Chr16: 15178186-15178685 Physcomitrium patens
Pp3c16_24260 0.5kb downstream 0.5kb downstream 11918 true Chr16: 15166268-15178185 Physcomitrium patens
Pp3c16_24260 0.5kb downstream 0.5kb downstream 500 false Chr16: 15166268-15166767 Physcomitrium patens
Pp3c16_24260 1.0kb upstream 1.0kb upstream 12418 true Chr16: 15166768-15179185 Physcomitrium patens
Pp3c16_24260 1.0kb upstream 1.0kb upstream 1000 false Chr16: 15178186-15179185 Physcomitrium patens
Pp3c16_24260 1.0kb downstream 1.0kb downstream 12418 true Chr16: 15165768-15178185 Physcomitrium patens
Pp3c16_24260 1.0kb downstream 1.0kb downstream 1000 false Chr16: 15165768-15166767 Physcomitrium patens
Pp3c16_24260 2.0kb upstream 2.0kb upstream 13418 true Chr16: 15166768-15180185 Physcomitrium patens
Pp3c16_24260 2.0kb upstream 2.0kb upstream 2000 false Chr16: 15178186-15180185 Physcomitrium patens
Pp3c16_24260 2.0kb downstream 2.0kb downstream 13418 true Chr16: 15164768-15178185 Physcomitrium patens
Pp3c16_24260 2.0kb downstream 2.0kb downstream 2000 false Chr16: 15164768-15166767 Physcomitrium patens
Pp3c16_24260 5.0kb upstream 5.0kb upstream 16418 true Chr16: 15166768-15183185 Physcomitrium patens
Pp3c16_24260 5.0kb upstream 5.0kb upstream 5000 false Chr16: 15178186-15183185 Physcomitrium patens
Pp3c16_24260 5.0kb downstream 5.0kb downstream 16418 true Chr16: 15161768-15178185 Physcomitrium patens
Pp3c16_24260 5.0kb downstream 5.0kb downstream 5000 false Chr16: 15161768-15166767 Physcomitrium patens
Pp3c16_24260 10.0kb upstream 10.0kb upstream 21418 true Chr16: 15166768-15188185 Physcomitrium patens
Pp3c16_24260 10.0kb upstream 10.0kb upstream 10000 false Chr16: 15178186-15188185 Physcomitrium patens
Pp3c16_24260 10.0kb downstream 10.0kb downstream 21418 true Chr16: 15156768-15178185 Physcomitrium patens
Pp3c16_24260 10.0kb downstream 10.0kb downstream 10000 false Chr16: 15156768-15166767 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121345698 5274 Embryophyte View MSA
123380257 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.136        
cufflinks 3.938        
cufflinks 4.067        
cufflinks 5.962       High
cufflinks 4.618        
cufflinks 4.765        
cufflinks 4.344        
cufflinks 4.943        
cufflinks 4.414        
cufflinks 4.346        
cufflinks 3.545       Low
cufflinks 4.183        
cufflinks 4.897        
cufflinks 3.123       Low
cufflinks 4.472        
cufflinks 4.928        
cufflinks 5.179       High
cufflinks 4.647        
cufflinks 4.908        
cufflinks 4.48        
cufflinks 3.515       Low
cufflinks 3.174       Low
cufflinks 2.814       Low
cufflinks 4.634        
cufflinks 4.435        
cufflinks 2.877       Low
cufflinks 4.438        
cufflinks 4.064        
cufflinks 4.582        
cufflinks 4.647        

0 Strain