Gene : Pp3c16_3330 P. patens v3.3
Defline:  (1 of 6) PTHR31087:SF11 - PROTEIN LURP-ONE-RELATED 1-RELATED Genomic Order:  186
Name:  ? Pp3c16_3330 Secondary Identifier:  ? PAC:32985062
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

9 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c16_3330 0.5kb upstream 0.5kb upstream 3529 true Chr16: 2165873-2169401 Physcomitrium patens
Pp3c16_3330 0.5kb upstream 0.5kb upstream 500 false Chr16: 2168902-2169401 Physcomitrium patens
Pp3c16_3330 0.5kb downstream 0.5kb downstream 3529 true Chr16: 2165373-2168901 Physcomitrium patens
Pp3c16_3330 0.5kb downstream 0.5kb downstream 500 false Chr16: 2165373-2165872 Physcomitrium patens
Pp3c16_3330 1.0kb upstream 1.0kb upstream 4029 true Chr16: 2165873-2169901 Physcomitrium patens
Pp3c16_3330 1.0kb upstream 1.0kb upstream 1000 false Chr16: 2168902-2169901 Physcomitrium patens
Pp3c16_3330 1.0kb downstream 1.0kb downstream 4029 true Chr16: 2164873-2168901 Physcomitrium patens
Pp3c16_3330 1.0kb downstream 1.0kb downstream 1000 false Chr16: 2164873-2165872 Physcomitrium patens
Pp3c16_3330 2.0kb upstream 2.0kb upstream 5029 true Chr16: 2165873-2170901 Physcomitrium patens
Pp3c16_3330 2.0kb upstream 2.0kb upstream 2000 false Chr16: 2168902-2170901 Physcomitrium patens
Pp3c16_3330 2.0kb downstream 2.0kb downstream 5029 true Chr16: 2163873-2168901 Physcomitrium patens
Pp3c16_3330 2.0kb downstream 2.0kb downstream 2000 false Chr16: 2163873-2165872 Physcomitrium patens
Pp3c16_3330 5.0kb upstream 5.0kb upstream 8029 true Chr16: 2165873-2173901 Physcomitrium patens
Pp3c16_3330 5.0kb upstream 5.0kb upstream 5000 false Chr16: 2168902-2173901 Physcomitrium patens
Pp3c16_3330 5.0kb downstream 5.0kb downstream 8029 true Chr16: 2160873-2168901 Physcomitrium patens
Pp3c16_3330 5.0kb downstream 5.0kb downstream 5000 false Chr16: 2160873-2165872 Physcomitrium patens
Pp3c16_3330 10.0kb upstream 10.0kb upstream 13029 true Chr16: 2165873-2178901 Physcomitrium patens
Pp3c16_3330 10.0kb upstream 10.0kb upstream 10000 false Chr16: 2168902-2178901 Physcomitrium patens
Pp3c16_3330 10.0kb downstream 10.0kb downstream 13029 true Chr16: 2155873-2168901 Physcomitrium patens
Pp3c16_3330 10.0kb downstream 10.0kb downstream 10000 false Chr16: 2155873-2165872 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121351653 5274 Embryophyte View MSA
123382260 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.806       High
cufflinks 0.188        
cufflinks 0.287        
cufflinks 0.707       High
cufflinks 0.199        
cufflinks 0.029     Low Low
cufflinks 0.216        
cufflinks 0.159        
cufflinks 0.737       High
cufflinks 0.277        
cufflinks 0.135        
cufflinks 0.671       High
cufflinks 0.439        
cufflinks 0.789       High
cufflinks 0.188        
cufflinks 0.405        
cufflinks 0.222        
cufflinks 0.2        
cufflinks 0.138        
cufflinks 0.25        
cufflinks 0.394        
cufflinks 0.144        
cufflinks 0.407        
cufflinks 0.384        
cufflinks 0.199        
cufflinks 0.314        
cufflinks 0.237        
cufflinks 0.365        
cufflinks 0.263        
cufflinks 0.077     Low Low

0 Strain