Gene : Pp3c16_20920 P. patens v3.3
Defline:  (1 of 4) 2.7.1.33 - Pantothenate kinase / Pantothenic acid kinase Genomic Order:  1088
Name:  ? Pp3c16_20920 Secondary Identifier:  ? PAC:32986185
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ppatens PANTO-PWY Physcomitrium patens pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

5 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c16_20920 0.5kb upstream 0.5kb upstream 6471 true Chr16: 12864389-12870859 Physcomitrium patens
Pp3c16_20920 0.5kb upstream 0.5kb upstream 500 false Chr16: 12870360-12870859 Physcomitrium patens
Pp3c16_20920 0.5kb downstream 0.5kb downstream 6471 true Chr16: 12863889-12870359 Physcomitrium patens
Pp3c16_20920 0.5kb downstream 0.5kb downstream 500 false Chr16: 12863889-12864388 Physcomitrium patens
Pp3c16_20920 1.0kb upstream 1.0kb upstream 6971 true Chr16: 12864389-12871359 Physcomitrium patens
Pp3c16_20920 1.0kb upstream 1.0kb upstream 1000 false Chr16: 12870360-12871359 Physcomitrium patens
Pp3c16_20920 1.0kb downstream 1.0kb downstream 6971 true Chr16: 12863389-12870359 Physcomitrium patens
Pp3c16_20920 1.0kb downstream 1.0kb downstream 1000 false Chr16: 12863389-12864388 Physcomitrium patens
Pp3c16_20920 2.0kb upstream 2.0kb upstream 7971 true Chr16: 12864389-12872359 Physcomitrium patens
Pp3c16_20920 2.0kb upstream 2.0kb upstream 2000 false Chr16: 12870360-12872359 Physcomitrium patens
Pp3c16_20920 2.0kb downstream 2.0kb downstream 7971 true Chr16: 12862389-12870359 Physcomitrium patens
Pp3c16_20920 2.0kb downstream 2.0kb downstream 2000 false Chr16: 12862389-12864388 Physcomitrium patens
Pp3c16_20920 5.0kb upstream 5.0kb upstream 10971 true Chr16: 12864389-12875359 Physcomitrium patens
Pp3c16_20920 5.0kb upstream 5.0kb upstream 5000 false Chr16: 12870360-12875359 Physcomitrium patens
Pp3c16_20920 5.0kb downstream 5.0kb downstream 10971 true Chr16: 12859389-12870359 Physcomitrium patens
Pp3c16_20920 5.0kb downstream 5.0kb downstream 5000 false Chr16: 12859389-12864388 Physcomitrium patens
Pp3c16_20920 10.0kb upstream 10.0kb upstream 15971 true Chr16: 12864389-12880359 Physcomitrium patens
Pp3c16_20920 10.0kb upstream 10.0kb upstream 10000 false Chr16: 12870360-12880359 Physcomitrium patens
Pp3c16_20920 10.0kb downstream 10.0kb downstream 15971 true Chr16: 12854389-12870359 Physcomitrium patens
Pp3c16_20920 10.0kb downstream 10.0kb downstream 10000 false Chr16: 12854389-12864388 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121349290 5274 Embryophyte View MSA
123381257 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.005     Low  
cufflinks 0.005     Low  
cufflinks 0.006     Low  
cufflinks 0.001     Low Low
cufflinks 0.005     Low  
cufflinks 0.01     Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.004     Low  
cufflinks 0.003     Low  
cufflinks 0.003     Low  
cufflinks 0.002     Low Low
cufflinks 0.008     Low High
cufflinks 0.007     Low  
cufflinks 0.005     Low  
cufflinks 0.002     Low Low
cufflinks 0.006     Low  
cufflinks 0.005     Low  
cufflinks 0.005     Low  
cufflinks 0.012     Low High
cufflinks 0.004     Low  
cufflinks 0.004     Low  
cufflinks 0.002     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.004     Low  
cufflinks 0.002     Low Low
cufflinks 0.004     Low  
cufflinks 0.002     Low Low
cufflinks 0.006     Low  
cufflinks 0.008     Low High
cufflinks 0.003     Low  

0 Strain