Gene : Pp3c16_5430 P. patens v3.3
Defline:  (1 of 1) PTHR24220:SF508 - ABC TRANSPORTER I FAMILY MEMBER 1 Genomic Order:  268
Name:  ? Pp3c16_5430 Secondary Identifier:  ? PAC:32986183
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

9 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c16_5430 0.5kb upstream 0.5kb upstream 3108 true Chr16: 3616272-3619379 Physcomitrium patens
Pp3c16_5430 0.5kb upstream 0.5kb upstream 500 false Chr16: 3618880-3619379 Physcomitrium patens
Pp3c16_5430 0.5kb downstream 0.5kb downstream 3108 true Chr16: 3615772-3618879 Physcomitrium patens
Pp3c16_5430 0.5kb downstream 0.5kb downstream 500 false Chr16: 3615772-3616271 Physcomitrium patens
Pp3c16_5430 1.0kb upstream 1.0kb upstream 3608 true Chr16: 3616272-3619879 Physcomitrium patens
Pp3c16_5430 1.0kb upstream 1.0kb upstream 1000 false Chr16: 3618880-3619879 Physcomitrium patens
Pp3c16_5430 1.0kb downstream 1.0kb downstream 3608 true Chr16: 3615272-3618879 Physcomitrium patens
Pp3c16_5430 1.0kb downstream 1.0kb downstream 1000 false Chr16: 3615272-3616271 Physcomitrium patens
Pp3c16_5430 2.0kb upstream 2.0kb upstream 4608 true Chr16: 3616272-3620879 Physcomitrium patens
Pp3c16_5430 2.0kb upstream 2.0kb upstream 2000 false Chr16: 3618880-3620879 Physcomitrium patens
Pp3c16_5430 2.0kb downstream 2.0kb downstream 4608 true Chr16: 3614272-3618879 Physcomitrium patens
Pp3c16_5430 2.0kb downstream 2.0kb downstream 2000 false Chr16: 3614272-3616271 Physcomitrium patens
Pp3c16_5430 5.0kb upstream 5.0kb upstream 7608 true Chr16: 3616272-3623879 Physcomitrium patens
Pp3c16_5430 5.0kb upstream 5.0kb upstream 5000 false Chr16: 3618880-3623879 Physcomitrium patens
Pp3c16_5430 5.0kb downstream 5.0kb downstream 7608 true Chr16: 3611272-3618879 Physcomitrium patens
Pp3c16_5430 5.0kb downstream 5.0kb downstream 5000 false Chr16: 3611272-3616271 Physcomitrium patens
Pp3c16_5430 10.0kb upstream 10.0kb upstream 12608 true Chr16: 3616272-3628879 Physcomitrium patens
Pp3c16_5430 10.0kb upstream 10.0kb upstream 10000 false Chr16: 3618880-3628879 Physcomitrium patens
Pp3c16_5430 10.0kb downstream 10.0kb downstream 12608 true Chr16: 3606272-3618879 Physcomitrium patens
Pp3c16_5430 10.0kb downstream 10.0kb downstream 10000 false Chr16: 3606272-3616271 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121344405 5274 Embryophyte View MSA
123380037 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.948        
cufflinks 2.47        
cufflinks 1.584        
cufflinks 4.54       High
cufflinks 1.968        
cufflinks 3.32       High
cufflinks 1.876        
cufflinks 1.293        
cufflinks 1.286        
cufflinks 1.741        
cufflinks 1.182       Low
cufflinks 1.428        
cufflinks 2.281        
cufflinks 1.164       Low
cufflinks 1.311        
cufflinks 2.755       High
cufflinks 2.284        
cufflinks 1.364        
cufflinks 1.381        
cufflinks 1.28        
cufflinks 1.33        
cufflinks 2.812       High
cufflinks 1.346        
cufflinks 1.624        
cufflinks 1.636        
cufflinks 1.542        
cufflinks 1.881        
cufflinks 1.972        
cufflinks 1.136       Low
cufflinks 3.927       High

0 Strain