Gene : Pp3c17_15280 P. patens v3.3
Genomic Order:  693 Name:  ? Pp3c17_15280
Secondary Identifier:  ? PAC:32907538
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

10 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c17_15280 0.5kb upstream 0.5kb upstream 5674 true Chr17: 10531710-10537383 Physcomitrium patens
Pp3c17_15280 0.5kb upstream 0.5kb upstream 500 false Chr17: 10531710-10532209 Physcomitrium patens
Pp3c17_15280 0.5kb downstream 0.5kb downstream 5674 true Chr17: 10532210-10537883 Physcomitrium patens
Pp3c17_15280 0.5kb downstream 0.5kb downstream 500 false Chr17: 10537384-10537883 Physcomitrium patens
Pp3c17_15280 1.0kb upstream 1.0kb upstream 6174 true Chr17: 10531210-10537383 Physcomitrium patens
Pp3c17_15280 1.0kb upstream 1.0kb upstream 1000 false Chr17: 10531210-10532209 Physcomitrium patens
Pp3c17_15280 1.0kb downstream 1.0kb downstream 6174 true Chr17: 10532210-10538383 Physcomitrium patens
Pp3c17_15280 1.0kb downstream 1.0kb downstream 1000 false Chr17: 10537384-10538383 Physcomitrium patens
Pp3c17_15280 2.0kb upstream 2.0kb upstream 7174 true Chr17: 10530210-10537383 Physcomitrium patens
Pp3c17_15280 2.0kb upstream 2.0kb upstream 2000 false Chr17: 10530210-10532209 Physcomitrium patens
Pp3c17_15280 2.0kb downstream 2.0kb downstream 7174 true Chr17: 10532210-10539383 Physcomitrium patens
Pp3c17_15280 2.0kb downstream 2.0kb downstream 2000 false Chr17: 10537384-10539383 Physcomitrium patens
Pp3c17_15280 5.0kb upstream 5.0kb upstream 10174 true Chr17: 10527210-10537383 Physcomitrium patens
Pp3c17_15280 5.0kb upstream 5.0kb upstream 5000 false Chr17: 10527210-10532209 Physcomitrium patens
Pp3c17_15280 5.0kb downstream 5.0kb downstream 10174 true Chr17: 10532210-10542383 Physcomitrium patens
Pp3c17_15280 5.0kb downstream 5.0kb downstream 5000 false Chr17: 10537384-10542383 Physcomitrium patens
Pp3c17_15280 10.0kb upstream 10.0kb upstream 15174 true Chr17: 10522210-10537383 Physcomitrium patens
Pp3c17_15280 10.0kb upstream 10.0kb upstream 10000 false Chr17: 10522210-10532209 Physcomitrium patens
Pp3c17_15280 10.0kb downstream 10.0kb downstream 15174 true Chr17: 10532210-10547383 Physcomitrium patens
Pp3c17_15280 10.0kb downstream 10.0kb downstream 10000 false Chr17: 10537384-10547383 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121347844 5274 Embryophyte View MSA
123425000 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.324       Low
cufflinks 2.655        
cufflinks 3.754       High
cufflinks 2.84        
cufflinks 1.52       Low
cufflinks 1.78        
cufflinks 1.291       Low
cufflinks 2.952       High
cufflinks 1.712        
cufflinks 2.441        
cufflinks 2.3        
cufflinks 1.904        
cufflinks 3.577       High
cufflinks 2.076        
cufflinks 1.827        
cufflinks 3.158       High
cufflinks 1.437       Low
cufflinks 2.478        
cufflinks 1.733        
cufflinks 1.804        
cufflinks 2.378        
cufflinks 1.422       Low
cufflinks 2.86        
cufflinks 2.162        
cufflinks 1.208       Low
cufflinks 1.749        
cufflinks 3.721       High
cufflinks 1.991        
cufflinks 2.425        
cufflinks 3.203       High

0 Strain