Gene : Pp3c17_1950 P. patens v3.3
Defline:  (1 of 1) PF08385 - Dynein heavy chain, N-terminal region 1 (DHC_N1) Genomic Order:  96
Name:  ? Pp3c17_1950 Secondary Identifier:  ? PAC:32906418
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c17_1950 0.5kb upstream 0.5kb upstream 1285 true Chr17: 1422108-1423392 Physcomitrium patens
Pp3c17_1950 0.5kb upstream 0.5kb upstream 500 false Chr17: 1422108-1422607 Physcomitrium patens
Pp3c17_1950 0.5kb downstream 0.5kb downstream 1285 true Chr17: 1422608-1423892 Physcomitrium patens
Pp3c17_1950 0.5kb downstream 0.5kb downstream 500 false Chr17: 1423393-1423892 Physcomitrium patens
Pp3c17_1950 1.0kb upstream 1.0kb upstream 1785 true Chr17: 1421608-1423392 Physcomitrium patens
Pp3c17_1950 1.0kb upstream 1.0kb upstream 1000 false Chr17: 1421608-1422607 Physcomitrium patens
Pp3c17_1950 1.0kb downstream 1.0kb downstream 1785 true Chr17: 1422608-1424392 Physcomitrium patens
Pp3c17_1950 1.0kb downstream 1.0kb downstream 1000 false Chr17: 1423393-1424392 Physcomitrium patens
Pp3c17_1950 2.0kb upstream 2.0kb upstream 2785 true Chr17: 1420608-1423392 Physcomitrium patens
Pp3c17_1950 2.0kb upstream 2.0kb upstream 2000 false Chr17: 1420608-1422607 Physcomitrium patens
Pp3c17_1950 2.0kb downstream 2.0kb downstream 2785 true Chr17: 1422608-1425392 Physcomitrium patens
Pp3c17_1950 2.0kb downstream 2.0kb downstream 2000 false Chr17: 1423393-1425392 Physcomitrium patens
Pp3c17_1950 5.0kb upstream 5.0kb upstream 5785 true Chr17: 1417608-1423392 Physcomitrium patens
Pp3c17_1950 5.0kb upstream 5.0kb upstream 5000 false Chr17: 1417608-1422607 Physcomitrium patens
Pp3c17_1950 5.0kb downstream 5.0kb downstream 5785 true Chr17: 1422608-1428392 Physcomitrium patens
Pp3c17_1950 5.0kb downstream 5.0kb downstream 5000 false Chr17: 1423393-1428392 Physcomitrium patens
Pp3c17_1950 10.0kb upstream 10.0kb upstream 10785 true Chr17: 1412608-1423392 Physcomitrium patens
Pp3c17_1950 10.0kb upstream 10.0kb upstream 10000 false Chr17: 1412608-1422607 Physcomitrium patens
Pp3c17_1950 10.0kb downstream 10.0kb downstream 10785 true Chr17: 1422608-1433392 Physcomitrium patens
Pp3c17_1950 10.0kb downstream 10.0kb downstream 10000 false Chr17: 1423393-1433392 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121325892 5274 Embryophyte Singleton cluster - no MSA
123362946 5275 Viridiplantae Singleton cluster - no MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain