Gene : Pp3c17_21910 P. patens v3.3
Defline:  (1 of 2) 6.3.5.1 - NAD(+) synthase (glutamine-hydrolyzing) / Nicotinamide adenine dinucleotide synthetase (glutamine) Genomic Order:  1041
Name:  ? Pp3c17_21910 Secondary Identifier:  ? PAC:32905460
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ppatens PWY-5381 Physcomitrium patens pathologic  
Ppatens PWY-5653 Physcomitrium patens pathologic  
Ppatens PYRIDNUCSYN-PWY Physcomitrium patens pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

9 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c17_21910 0.5kb upstream 0.5kb upstream 7199 true Chr17: 14327240-14334438 Physcomitrium patens
Pp3c17_21910 0.5kb upstream 0.5kb upstream 500 false Chr17: 14327240-14327739 Physcomitrium patens
Pp3c17_21910 0.5kb downstream 0.5kb downstream 7199 true Chr17: 14327740-14334938 Physcomitrium patens
Pp3c17_21910 0.5kb downstream 0.5kb downstream 500 false Chr17: 14334439-14334938 Physcomitrium patens
Pp3c17_21910 1.0kb upstream 1.0kb upstream 7699 true Chr17: 14326740-14334438 Physcomitrium patens
Pp3c17_21910 1.0kb upstream 1.0kb upstream 1000 false Chr17: 14326740-14327739 Physcomitrium patens
Pp3c17_21910 1.0kb downstream 1.0kb downstream 7699 true Chr17: 14327740-14335438 Physcomitrium patens
Pp3c17_21910 1.0kb downstream 1.0kb downstream 1000 false Chr17: 14334439-14335438 Physcomitrium patens
Pp3c17_21910 2.0kb upstream 2.0kb upstream 8699 true Chr17: 14325740-14334438 Physcomitrium patens
Pp3c17_21910 2.0kb upstream 2.0kb upstream 2000 false Chr17: 14325740-14327739 Physcomitrium patens
Pp3c17_21910 2.0kb downstream 2.0kb downstream 8699 true Chr17: 14327740-14336438 Physcomitrium patens
Pp3c17_21910 2.0kb downstream 2.0kb downstream 2000 false Chr17: 14334439-14336438 Physcomitrium patens
Pp3c17_21910 5.0kb upstream 5.0kb upstream 11699 true Chr17: 14322740-14334438 Physcomitrium patens
Pp3c17_21910 5.0kb upstream 5.0kb upstream 5000 false Chr17: 14322740-14327739 Physcomitrium patens
Pp3c17_21910 5.0kb downstream 5.0kb downstream 11699 true Chr17: 14327740-14339438 Physcomitrium patens
Pp3c17_21910 5.0kb downstream 5.0kb downstream 5000 false Chr17: 14334439-14339438 Physcomitrium patens
Pp3c17_21910 10.0kb upstream 10.0kb upstream 16699 true Chr17: 14317740-14334438 Physcomitrium patens
Pp3c17_21910 10.0kb upstream 10.0kb upstream 10000 false Chr17: 14317740-14327739 Physcomitrium patens
Pp3c17_21910 10.0kb downstream 10.0kb downstream 16699 true Chr17: 14327740-14344438 Physcomitrium patens
Pp3c17_21910 10.0kb downstream 10.0kb downstream 10000 false Chr17: 14334439-14344438 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121349745 5274 Embryophyte View MSA
123423795 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.307        
cufflinks 6.042        
cufflinks 3.21       Low
cufflinks 9.021       High
cufflinks 6.885        
cufflinks 8.992       High
cufflinks 6.394        
cufflinks 5.175        
cufflinks 6.755        
cufflinks 4.163        
cufflinks 6.709        
cufflinks 7.979        
cufflinks 6.157        
cufflinks 9.15       High
cufflinks 4.825        
cufflinks 7.137        
cufflinks 6.423        
cufflinks 4.991        
cufflinks 4.995        
cufflinks 7.672        
cufflinks 3.578       Low
cufflinks 3.719       Low
cufflinks 2.068       Low
cufflinks 6.248        
cufflinks 8.249       High
cufflinks 2.065       Low
cufflinks 7.274        
cufflinks 4.976        
cufflinks 4.122        
cufflinks 4.98        

0 Strain