Gene : Pp3c18_1320 P. patens v3.3
Defline:  (1 of 1) PTHR21314:SF0 - UPF0553 PROTEIN C9ORF64 Genomic Order:  31
Name:  ? Pp3c18_1320 Secondary Identifier:  ? PAC:32982321
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

8 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c18_1320 0.5kb upstream 0.5kb upstream 3637 true Chr18: 1313421-1317057 Physcomitrium patens
Pp3c18_1320 0.5kb upstream 0.5kb upstream 500 false Chr18: 1316558-1317057 Physcomitrium patens
Pp3c18_1320 0.5kb downstream 0.5kb downstream 3637 true Chr18: 1312921-1316557 Physcomitrium patens
Pp3c18_1320 0.5kb downstream 0.5kb downstream 500 false Chr18: 1312921-1313420 Physcomitrium patens
Pp3c18_1320 1.0kb upstream 1.0kb upstream 4137 true Chr18: 1313421-1317557 Physcomitrium patens
Pp3c18_1320 1.0kb upstream 1.0kb upstream 1000 false Chr18: 1316558-1317557 Physcomitrium patens
Pp3c18_1320 1.0kb downstream 1.0kb downstream 4137 true Chr18: 1312421-1316557 Physcomitrium patens
Pp3c18_1320 1.0kb downstream 1.0kb downstream 1000 false Chr18: 1312421-1313420 Physcomitrium patens
Pp3c18_1320 2.0kb upstream 2.0kb upstream 5137 true Chr18: 1313421-1318557 Physcomitrium patens
Pp3c18_1320 2.0kb upstream 2.0kb upstream 2000 false Chr18: 1316558-1318557 Physcomitrium patens
Pp3c18_1320 2.0kb downstream 2.0kb downstream 5137 true Chr18: 1311421-1316557 Physcomitrium patens
Pp3c18_1320 2.0kb downstream 2.0kb downstream 2000 false Chr18: 1311421-1313420 Physcomitrium patens
Pp3c18_1320 5.0kb upstream 5.0kb upstream 8137 true Chr18: 1313421-1321557 Physcomitrium patens
Pp3c18_1320 5.0kb upstream 5.0kb upstream 5000 false Chr18: 1316558-1321557 Physcomitrium patens
Pp3c18_1320 5.0kb downstream 5.0kb downstream 8137 true Chr18: 1308421-1316557 Physcomitrium patens
Pp3c18_1320 5.0kb downstream 5.0kb downstream 5000 false Chr18: 1308421-1313420 Physcomitrium patens
Pp3c18_1320 10.0kb upstream 10.0kb upstream 13137 true Chr18: 1313421-1326557 Physcomitrium patens
Pp3c18_1320 10.0kb upstream 10.0kb upstream 10000 false Chr18: 1316558-1326557 Physcomitrium patens
Pp3c18_1320 10.0kb downstream 10.0kb downstream 13137 true Chr18: 1303421-1316557 Physcomitrium patens
Pp3c18_1320 10.0kb downstream 10.0kb downstream 10000 false Chr18: 1303421-1313420 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121348381 5274 Embryophyte View MSA
123425708 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.024        
cufflinks 0.201       Low
cufflinks 0.506        
cufflinks 0.589        
cufflinks 0.745        
cufflinks 1.106        
cufflinks 4.587       High
cufflinks 1.047        
cufflinks 0.499        
cufflinks 0.128       Low
cufflinks 0.443        
cufflinks 0.763        
cufflinks 0.715        
cufflinks 0.373        
cufflinks 0.29        
cufflinks 0.909        
cufflinks 0.654        
cufflinks 0.958        
cufflinks 0.208       Low
cufflinks 1.154        
cufflinks 0.739        
cufflinks 0.288        
cufflinks 0.96        
cufflinks 0.097       Low
cufflinks 0.759        
cufflinks 0.3        
cufflinks 0.15       Low
cufflinks 0.34        
cufflinks 0.48        
cufflinks 0.711        

0 Strain