Gene : Pp3c18_14170 P. patens v3.3
Genomic Order:  563 Name:  ? Pp3c18_14170
Secondary Identifier:  ? PAC:32982789
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c18_14170 0.5kb upstream 0.5kb upstream 2261 true Chr18: 10210594-10212854 Physcomitrium patens
Pp3c18_14170 0.5kb upstream 0.5kb upstream 500 false Chr18: 10212355-10212854 Physcomitrium patens
Pp3c18_14170 0.5kb downstream 0.5kb downstream 2261 true Chr18: 10210094-10212354 Physcomitrium patens
Pp3c18_14170 0.5kb downstream 0.5kb downstream 500 false Chr18: 10210094-10210593 Physcomitrium patens
Pp3c18_14170 1.0kb upstream 1.0kb upstream 2761 true Chr18: 10210594-10213354 Physcomitrium patens
Pp3c18_14170 1.0kb upstream 1.0kb upstream 1000 false Chr18: 10212355-10213354 Physcomitrium patens
Pp3c18_14170 1.0kb downstream 1.0kb downstream 2761 true Chr18: 10209594-10212354 Physcomitrium patens
Pp3c18_14170 1.0kb downstream 1.0kb downstream 1000 false Chr18: 10209594-10210593 Physcomitrium patens
Pp3c18_14170 2.0kb upstream 2.0kb upstream 3761 true Chr18: 10210594-10214354 Physcomitrium patens
Pp3c18_14170 2.0kb upstream 2.0kb upstream 2000 false Chr18: 10212355-10214354 Physcomitrium patens
Pp3c18_14170 2.0kb downstream 2.0kb downstream 3761 true Chr18: 10208594-10212354 Physcomitrium patens
Pp3c18_14170 2.0kb downstream 2.0kb downstream 2000 false Chr18: 10208594-10210593 Physcomitrium patens
Pp3c18_14170 5.0kb upstream 5.0kb upstream 6761 true Chr18: 10210594-10217354 Physcomitrium patens
Pp3c18_14170 5.0kb upstream 5.0kb upstream 5000 false Chr18: 10212355-10217354 Physcomitrium patens
Pp3c18_14170 5.0kb downstream 5.0kb downstream 6761 true Chr18: 10205594-10212354 Physcomitrium patens
Pp3c18_14170 5.0kb downstream 5.0kb downstream 5000 false Chr18: 10205594-10210593 Physcomitrium patens
Pp3c18_14170 10.0kb upstream 10.0kb upstream 11761 true Chr18: 10210594-10222354 Physcomitrium patens
Pp3c18_14170 10.0kb upstream 10.0kb upstream 10000 false Chr18: 10212355-10222354 Physcomitrium patens
Pp3c18_14170 10.0kb downstream 10.0kb downstream 11761 true Chr18: 10200594-10212354 Physcomitrium patens
Pp3c18_14170 10.0kb downstream 10.0kb downstream 10000 false Chr18: 10200594-10210593 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121335764 5274 Embryophyte Singleton cluster - no MSA
123372614 5275 Viridiplantae Singleton cluster - no MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.004     Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.001     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.001     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain