Gene : Pp3c18_13830 P. patens v3.3
Defline:  (1 of 2) PF00122//PF00689//PF00690//PF13246 - E1-E2 ATPase (E1-E2_ATPase) // Cation transporting ATPase, C-terminus (Cation_ATPase_C) // Cation transporter/ATPase, N-terminus (Cation_ATPase_N) // Cation transport ATPase (P-type) (Cation_ATPase) Genomic Order:  549
Name:  ? Pp3c18_13830 Secondary Identifier:  ? PAC:32981879
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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6 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c18_13830 0.5kb upstream 0.5kb upstream 4269 true Chr18: 9938027-9942295 Physcomitrium patens
Pp3c18_13830 0.5kb upstream 0.5kb upstream 500 false Chr18: 9941796-9942295 Physcomitrium patens
Pp3c18_13830 0.5kb downstream 0.5kb downstream 4269 true Chr18: 9937527-9941795 Physcomitrium patens
Pp3c18_13830 0.5kb downstream 0.5kb downstream 500 false Chr18: 9937527-9938026 Physcomitrium patens
Pp3c18_13830 1.0kb upstream 1.0kb upstream 4769 true Chr18: 9938027-9942795 Physcomitrium patens
Pp3c18_13830 1.0kb upstream 1.0kb upstream 1000 false Chr18: 9941796-9942795 Physcomitrium patens
Pp3c18_13830 1.0kb downstream 1.0kb downstream 4769 true Chr18: 9937027-9941795 Physcomitrium patens
Pp3c18_13830 1.0kb downstream 1.0kb downstream 1000 false Chr18: 9937027-9938026 Physcomitrium patens
Pp3c18_13830 2.0kb upstream 2.0kb upstream 5769 true Chr18: 9938027-9943795 Physcomitrium patens
Pp3c18_13830 2.0kb upstream 2.0kb upstream 2000 false Chr18: 9941796-9943795 Physcomitrium patens
Pp3c18_13830 2.0kb downstream 2.0kb downstream 5769 true Chr18: 9936027-9941795 Physcomitrium patens
Pp3c18_13830 2.0kb downstream 2.0kb downstream 2000 false Chr18: 9936027-9938026 Physcomitrium patens
Pp3c18_13830 5.0kb upstream 5.0kb upstream 8769 true Chr18: 9938027-9946795 Physcomitrium patens
Pp3c18_13830 5.0kb upstream 5.0kb upstream 5000 false Chr18: 9941796-9946795 Physcomitrium patens
Pp3c18_13830 5.0kb downstream 5.0kb downstream 8769 true Chr18: 9933027-9941795 Physcomitrium patens
Pp3c18_13830 5.0kb downstream 5.0kb downstream 5000 false Chr18: 9933027-9938026 Physcomitrium patens
Pp3c18_13830 10.0kb upstream 10.0kb upstream 13769 true Chr18: 9938027-9951795 Physcomitrium patens
Pp3c18_13830 10.0kb upstream 10.0kb upstream 10000 false Chr18: 9941796-9951795 Physcomitrium patens
Pp3c18_13830 10.0kb downstream 10.0kb downstream 13769 true Chr18: 9928027-9941795 Physcomitrium patens
Pp3c18_13830 10.0kb downstream 10.0kb downstream 10000 false Chr18: 9928027-9938026 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121352041 5274 Embryophyte View MSA
123427421 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.115        
cufflinks 0.01     Low Low
cufflinks 0.021     Low  
cufflinks 0.25        
cufflinks 0.326        
cufflinks 0.013     Low Low
cufflinks 0.038     Low  
cufflinks 7.917       High
cufflinks 0.194        
cufflinks 0.034     Low  
cufflinks 0.038     Low  
cufflinks 7.747       High
cufflinks 0.079     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.119        
cufflinks 0.009     Low Low
cufflinks 2.107       High
cufflinks 0.043     Low  
cufflinks 0.014     Low Low
cufflinks 0.017     Low  
cufflinks 0.012     Low Low
cufflinks 0.488        
cufflinks 0.317        
cufflinks 0.072     Low  
cufflinks 7.177       High
cufflinks 2.016       High
cufflinks 0.111        
cufflinks 0.028     Low  
cufflinks 1.52       High
cufflinks 0.181        

0 Strain