Gene : Pp3c17_17070 P. patens v3.3
Defline:  (1 of 1) PTHR13015 - PROTEIN AD-016-RELATED Genomic Order:  781
Name:  ? Pp3c17_17070 Secondary Identifier:  ? PAC:32906930
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c17_17070 0.5kb upstream 0.5kb upstream 1683 true Chr17: 11561594-11563276 Physcomitrium patens
Pp3c17_17070 0.5kb upstream 0.5kb upstream 500 false Chr17: 11562777-11563276 Physcomitrium patens
Pp3c17_17070 0.5kb downstream 0.5kb downstream 1683 true Chr17: 11561094-11562776 Physcomitrium patens
Pp3c17_17070 0.5kb downstream 0.5kb downstream 500 false Chr17: 11561094-11561593 Physcomitrium patens
Pp3c17_17070 1.0kb upstream 1.0kb upstream 2183 true Chr17: 11561594-11563776 Physcomitrium patens
Pp3c17_17070 1.0kb upstream 1.0kb upstream 1000 false Chr17: 11562777-11563776 Physcomitrium patens
Pp3c17_17070 1.0kb downstream 1.0kb downstream 2183 true Chr17: 11560594-11562776 Physcomitrium patens
Pp3c17_17070 1.0kb downstream 1.0kb downstream 1000 false Chr17: 11560594-11561593 Physcomitrium patens
Pp3c17_17070 2.0kb upstream 2.0kb upstream 3183 true Chr17: 11561594-11564776 Physcomitrium patens
Pp3c17_17070 2.0kb upstream 2.0kb upstream 2000 false Chr17: 11562777-11564776 Physcomitrium patens
Pp3c17_17070 2.0kb downstream 2.0kb downstream 3183 true Chr17: 11559594-11562776 Physcomitrium patens
Pp3c17_17070 2.0kb downstream 2.0kb downstream 2000 false Chr17: 11559594-11561593 Physcomitrium patens
Pp3c17_17070 5.0kb upstream 5.0kb upstream 6183 true Chr17: 11561594-11567776 Physcomitrium patens
Pp3c17_17070 5.0kb upstream 5.0kb upstream 5000 false Chr17: 11562777-11567776 Physcomitrium patens
Pp3c17_17070 5.0kb downstream 5.0kb downstream 6183 true Chr17: 11556594-11562776 Physcomitrium patens
Pp3c17_17070 5.0kb downstream 5.0kb downstream 5000 false Chr17: 11556594-11561593 Physcomitrium patens
Pp3c17_17070 10.0kb upstream 10.0kb upstream 11183 true Chr17: 11561594-11572776 Physcomitrium patens
Pp3c17_17070 10.0kb upstream 10.0kb upstream 10000 false Chr17: 11562777-11572776 Physcomitrium patens
Pp3c17_17070 10.0kb downstream 10.0kb downstream 11183 true Chr17: 11551594-11562776 Physcomitrium patens
Pp3c17_17070 10.0kb downstream 10.0kb downstream 10000 false Chr17: 11551594-11561593 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121325965 5274 Embryophyte Singleton cluster - no MSA
123363014 5275 Viridiplantae Singleton cluster - no MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.001     Low  
cufflinks 0.001     Low  
cufflinks 0.001     Low  
cufflinks 0.002     Low  
cufflinks 0.001     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.001     Low  
cufflinks 0.002     Low  
cufflinks 0.001     Low  
cufflinks 0.001     Low  
cufflinks 0.001     Low  
cufflinks 0.002     Low  
cufflinks 0.002     Low  
cufflinks 0.001     Low  
cufflinks 0.001     Low  
cufflinks 0.001     Low  
cufflinks 0.002     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.001     Low  
cufflinks 0.002     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.001     Low  
cufflinks 0.002     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.001     Low  
cufflinks 0.001     Low  
cufflinks 0.002     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.002     Low  
cufflinks 0.002     Low  

0 Strain