Gene : Pp3c17_10060 P. patens v3.3
Defline:  (1 of 32) 2.7.11.25 - Mitogen-activated protein kinase kinase kinase / MLTK Genomic Order:  438
Name:  ? Pp3c17_10060 Secondary Identifier:  ? PAC:32908172
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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6 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c17_10060 0.5kb upstream 0.5kb upstream 6696 true Chr17: 7156492-7163187 Physcomitrium patens
Pp3c17_10060 0.5kb upstream 0.5kb upstream 500 false Chr17: 7156492-7156991 Physcomitrium patens
Pp3c17_10060 0.5kb downstream 0.5kb downstream 6696 true Chr17: 7156992-7163687 Physcomitrium patens
Pp3c17_10060 0.5kb downstream 0.5kb downstream 500 false Chr17: 7163188-7163687 Physcomitrium patens
Pp3c17_10060 1.0kb upstream 1.0kb upstream 7196 true Chr17: 7155992-7163187 Physcomitrium patens
Pp3c17_10060 1.0kb upstream 1.0kb upstream 1000 false Chr17: 7155992-7156991 Physcomitrium patens
Pp3c17_10060 1.0kb downstream 1.0kb downstream 7196 true Chr17: 7156992-7164187 Physcomitrium patens
Pp3c17_10060 1.0kb downstream 1.0kb downstream 1000 false Chr17: 7163188-7164187 Physcomitrium patens
Pp3c17_10060 2.0kb upstream 2.0kb upstream 8196 true Chr17: 7154992-7163187 Physcomitrium patens
Pp3c17_10060 2.0kb upstream 2.0kb upstream 2000 false Chr17: 7154992-7156991 Physcomitrium patens
Pp3c17_10060 2.0kb downstream 2.0kb downstream 8196 true Chr17: 7156992-7165187 Physcomitrium patens
Pp3c17_10060 2.0kb downstream 2.0kb downstream 2000 false Chr17: 7163188-7165187 Physcomitrium patens
Pp3c17_10060 5.0kb upstream 5.0kb upstream 11196 true Chr17: 7151992-7163187 Physcomitrium patens
Pp3c17_10060 5.0kb upstream 5.0kb upstream 5000 false Chr17: 7151992-7156991 Physcomitrium patens
Pp3c17_10060 5.0kb downstream 5.0kb downstream 11196 true Chr17: 7156992-7168187 Physcomitrium patens
Pp3c17_10060 5.0kb downstream 5.0kb downstream 5000 false Chr17: 7163188-7168187 Physcomitrium patens
Pp3c17_10060 10.0kb upstream 10.0kb upstream 16196 true Chr17: 7146992-7163187 Physcomitrium patens
Pp3c17_10060 10.0kb upstream 10.0kb upstream 10000 false Chr17: 7146992-7156991 Physcomitrium patens
Pp3c17_10060 10.0kb downstream 10.0kb downstream 16196 true Chr17: 7156992-7173187 Physcomitrium patens
Pp3c17_10060 10.0kb downstream 10.0kb downstream 10000 false Chr17: 7163188-7173187 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121343304 5274 Embryophyte View MSA
123379585 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.119        
cufflinks 1.837        
cufflinks 1.328        
cufflinks 1.993        
cufflinks 1.257        
cufflinks 2.416        
cufflinks 0.066       Low
cufflinks 0.896        
cufflinks 1.286        
cufflinks 0.302        
cufflinks 2.101        
cufflinks 2.425        
cufflinks 0.032     Low Low
cufflinks 2.802       High
cufflinks 1.16        
cufflinks 0.126       Low
cufflinks 0.771        
cufflinks 1.912        
cufflinks 3.177       High
cufflinks 1.343        
cufflinks 0.134       Low
cufflinks 1.186        
cufflinks 2.667        
cufflinks 0.314        
cufflinks 0.052       Low
cufflinks 0.325        
cufflinks 0.91        
cufflinks 0.956        
cufflinks 0.157       Low
cufflinks 0.833        

0 Strain