Gene : Pp3c18_21640 P. patens v3.3
Defline:  (1 of 7) PTHR11075 - PEPTIDE CHAIN RELEASE FACTOR Genomic Order:  892
Name:  ? Pp3c18_21640 Secondary Identifier:  ? PAC:32982936
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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9 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c18_21640 0.5kb upstream 0.5kb upstream 4540 true Chr18: 15129280-15133819 Physcomitrium patens
Pp3c18_21640 0.5kb upstream 0.5kb upstream 500 false Chr18: 15133320-15133819 Physcomitrium patens
Pp3c18_21640 0.5kb downstream 0.5kb downstream 4540 true Chr18: 15128780-15133319 Physcomitrium patens
Pp3c18_21640 0.5kb downstream 0.5kb downstream 500 false Chr18: 15128780-15129279 Physcomitrium patens
Pp3c18_21640 1.0kb upstream 1.0kb upstream 5040 true Chr18: 15129280-15134319 Physcomitrium patens
Pp3c18_21640 1.0kb upstream 1.0kb upstream 1000 false Chr18: 15133320-15134319 Physcomitrium patens
Pp3c18_21640 1.0kb downstream 1.0kb downstream 5040 true Chr18: 15128280-15133319 Physcomitrium patens
Pp3c18_21640 1.0kb downstream 1.0kb downstream 1000 false Chr18: 15128280-15129279 Physcomitrium patens
Pp3c18_21640 2.0kb upstream 2.0kb upstream 6040 true Chr18: 15129280-15135319 Physcomitrium patens
Pp3c18_21640 2.0kb upstream 2.0kb upstream 2000 false Chr18: 15133320-15135319 Physcomitrium patens
Pp3c18_21640 2.0kb downstream 2.0kb downstream 6040 true Chr18: 15127280-15133319 Physcomitrium patens
Pp3c18_21640 2.0kb downstream 2.0kb downstream 2000 false Chr18: 15127280-15129279 Physcomitrium patens
Pp3c18_21640 5.0kb upstream 5.0kb upstream 9040 true Chr18: 15129280-15138319 Physcomitrium patens
Pp3c18_21640 5.0kb upstream 5.0kb upstream 5000 false Chr18: 15133320-15138319 Physcomitrium patens
Pp3c18_21640 5.0kb downstream 5.0kb downstream 9040 true Chr18: 15124280-15133319 Physcomitrium patens
Pp3c18_21640 5.0kb downstream 5.0kb downstream 5000 false Chr18: 15124280-15129279 Physcomitrium patens
Pp3c18_21640 10.0kb upstream 10.0kb upstream 14040 true Chr18: 15129280-15143319 Physcomitrium patens
Pp3c18_21640 10.0kb upstream 10.0kb upstream 10000 false Chr18: 15133320-15143319 Physcomitrium patens
Pp3c18_21640 10.0kb downstream 10.0kb downstream 14040 true Chr18: 15119280-15133319 Physcomitrium patens
Pp3c18_21640 10.0kb downstream 10.0kb downstream 10000 false Chr18: 15119280-15129279 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121346741 5274 Embryophyte View MSA
123380435 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.771       Low
cufflinks 10.176        
cufflinks 9.977        
cufflinks 18.344        
cufflinks 19.938        
cufflinks 13.378        
cufflinks 2.269       Low
cufflinks 10.783        
cufflinks 20.038        
cufflinks 59.403     High High
cufflinks 15.878        
cufflinks 19.247        
cufflinks 12.889        
cufflinks 15.82        
cufflinks 10.187        
cufflinks 8.112        
cufflinks 15.631        
cufflinks 43.118     High High
cufflinks 18.285        
cufflinks 10.3        
cufflinks 11.197        
cufflinks 20.68        
cufflinks 15.017        
cufflinks 14.14        
cufflinks 11.969        
cufflinks 2.887       Low
cufflinks 14.983        
cufflinks 4.602       Low
cufflinks 6.312       Low
cufflinks 16.652        

0 Strain