Gene : Pp3c18_21070 P. patens v3.3
Defline:  (1 of 4) PF01713//PF08590 - Smr domain (Smr) // Domain of unknown function (DUF1771) (DUF1771) Genomic Order:  859
Name:  ? Pp3c18_21070 Secondary Identifier:  ? PAC:32981308
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

9 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c18_21070 0.5kb upstream 0.5kb upstream 3687 true Chr18: 14867941-14871627 Physcomitrium patens
Pp3c18_21070 0.5kb upstream 0.5kb upstream 500 false Chr18: 14867941-14868440 Physcomitrium patens
Pp3c18_21070 0.5kb downstream 0.5kb downstream 3687 true Chr18: 14868441-14872127 Physcomitrium patens
Pp3c18_21070 0.5kb downstream 0.5kb downstream 500 false Chr18: 14871628-14872127 Physcomitrium patens
Pp3c18_21070 1.0kb upstream 1.0kb upstream 4187 true Chr18: 14867441-14871627 Physcomitrium patens
Pp3c18_21070 1.0kb upstream 1.0kb upstream 1000 false Chr18: 14867441-14868440 Physcomitrium patens
Pp3c18_21070 1.0kb downstream 1.0kb downstream 4187 true Chr18: 14868441-14872627 Physcomitrium patens
Pp3c18_21070 1.0kb downstream 1.0kb downstream 1000 false Chr18: 14871628-14872627 Physcomitrium patens
Pp3c18_21070 2.0kb upstream 2.0kb upstream 5187 true Chr18: 14866441-14871627 Physcomitrium patens
Pp3c18_21070 2.0kb upstream 2.0kb upstream 2000 false Chr18: 14866441-14868440 Physcomitrium patens
Pp3c18_21070 2.0kb downstream 2.0kb downstream 5187 true Chr18: 14868441-14873627 Physcomitrium patens
Pp3c18_21070 2.0kb downstream 2.0kb downstream 2000 false Chr18: 14871628-14873627 Physcomitrium patens
Pp3c18_21070 5.0kb upstream 5.0kb upstream 8187 true Chr18: 14863441-14871627 Physcomitrium patens
Pp3c18_21070 5.0kb upstream 5.0kb upstream 5000 false Chr18: 14863441-14868440 Physcomitrium patens
Pp3c18_21070 5.0kb downstream 5.0kb downstream 8187 true Chr18: 14868441-14876627 Physcomitrium patens
Pp3c18_21070 5.0kb downstream 5.0kb downstream 5000 false Chr18: 14871628-14876627 Physcomitrium patens
Pp3c18_21070 10.0kb upstream 10.0kb upstream 13187 true Chr18: 14858441-14871627 Physcomitrium patens
Pp3c18_21070 10.0kb upstream 10.0kb upstream 10000 false Chr18: 14858441-14868440 Physcomitrium patens
Pp3c18_21070 10.0kb downstream 10.0kb downstream 13187 true Chr18: 14868441-14881627 Physcomitrium patens
Pp3c18_21070 10.0kb downstream 10.0kb downstream 10000 false Chr18: 14871628-14881627 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121344234 5274 Embryophyte View MSA
123380011 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.716        
cufflinks 1.942        
cufflinks 2.935       High
cufflinks 2.614        
cufflinks 2.814       High
cufflinks 1.493        
cufflinks 1.282        
cufflinks 2.017        
cufflinks 2.568        
cufflinks 1.613        
cufflinks 2.611        
cufflinks 1.819        
cufflinks 0.778       Low
cufflinks 1.597        
cufflinks 2.621        
cufflinks 1.86        
cufflinks 1.19        
cufflinks 4.315       High
cufflinks 0.972       Low
cufflinks 1.276        
cufflinks 2.197        
cufflinks 2.863       High
cufflinks 1.798        
cufflinks 1.355        
cufflinks 3.428       High
cufflinks 0.766       Low
cufflinks 2.163        
cufflinks 1.613        
cufflinks 1.017       Low
cufflinks 1.14       Low

0 Strain